Beggiatoa leptomitoformis: AL038_10735
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Entry
AL038_10735 CDS
T04090
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL038_10735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blep03019
]
AL038_10735
03009 Ribosome biogenesis [BR:
blep03009
]
AL038_10735
Enzymes [BR:
blep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AL038_10735
Messenger RNA biogenesis [BR:
blep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AL038_10735
Ribosome biogenesis [BR:
blep03009
]
Prokaryotic type
rRNA helicases
AL038_10735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALG69447
UniProt:
A0A2N9YJI1
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All DBs
Position
complement(2587861..2589777)
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AA seq
638 aa
AA seq
DB search
MPTEIISHFSQLALAPAVLKAVDEIGYETPSPIQAESIPPLLAGRDLLGQAQTGTGKTAA
FALPLLSRLNLELNTPQVLVLTPTRELAIQVAEAMQKYARHLPDFHVLPIYGGQDMGSQL
RQLKRGVHIVVGTPGRILDHLGRGTLRLNQIATLVLDEADEMLRMGFIDDVEEILNHTPK
ERQVALFSATMPDAIRQVARRHLKDPVEIRIQTKTVTVSSISQRYWQVSGVHKLDALTRI
LEVEEFDAIIIFVRTKTATVELAEKLEARGYASSPLNGDMNQSLREKTVERLKNGALDIV
IATDVAARGLNVERITHVINYDIPTDTEAYVHRIGRTGRAGRKGEAILFVSPREQRMLRD
IERATRQPITQMQLPSHEDITDKRISQFKQSITDAMASEDLSFFENIINGYQQDHDTGLN
EIAAALAFLVQRERPLLLPKKEEKPFKEEANEEGRRTRSPRNRNEREQRPERAERSERAP
AKPRAERPERAERTERGDAPSGAMMRYRIEVGRTHGAQPKHIVGAIANEAGLDSNNIGQI
KLYDTYSTVDLPEGMPKDVFQHLQKVWVCGQQLRVSVDTDGAAPAPAPSRARSSEPRTTK
PRADKPRTRTTSLTSSTDKPRSKTGGDTLRIKRTKKVD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagaaattattagccatttttcgcaactggcacttgcacccgctgttcttaaa
gctgttgatgaaatcggttacgaaaccccctcaccgattcaagcagaaagtatccccccg
ttgctcgcaggtcgtgatttgttaggtcaagcccagacaggtacaggcaaaacggccgcc
tttgccttgcctctcttgagtcgtctgaaccttgaattgaatacaccacaagttttggtg
ttgacaccaacccgcgaattagctatccaagtcgctgaggcgatgcaaaaatacgcccgc
cacttacccgattttcatgtgttacctatctatggtgggcaagacatggggtcacaatta
cgccaattaaagcgtggggtgcatatcgttgttggtacacccggtcgtatattagatcat
ttgggacgtggaacacttcgtttaaaccaaattgctacccttgtgttggatgaagcagac
gaaatgttgcgtatgggctttattgatgatgtggaagaaattcttaaccacacacctaaa
gaacgtcaagttgcgctgttttctgccaccatgccagatgcaattcgtcaggttgcccgt
cgtcatttaaaagaccccgtagaaatccgaattcaaacaaaaaccgtaacggtttctagt
atttctcaacgttattggcaagtatctggtgtacacaaactggatgcattaactcggatt
ttagaagtagaagagtttgatgcaattattatttttgttcgcactaaaacagcaaccgtt
gaattagctgaaaaattagaagcgcgtggctacgctagctctccattaaatggagatatg
aatcaatctttacgtgaaaaaactgttgaacgtttaaaaaatggtgcgttagacattgta
attgctacagacgttgccgctcgcggtttaaacgttgaacgtattacacatgttattaat
tatgatattccgactgacacagaagcctatgtacatcggattgggcgcacgggacgtgcg
ggacgtaaaggcgaagccattttattcgtttcccctcgtgaacaacgcatgttacgcgac
attgaacgggcaacacgtcaacctatcacacagatgcaattgcccagtcatgaagacatt
actgataaacgtattagtcaatttaaacaatctattactgatgcaatggcttctgaagat
ttaagtttcttcgaaaatattattaatggctatcaacaagatcatgacacgggcttaaat
gaaattgctgccgcccttgcgtttcttgtacaacgagaacgtccattactcttacccaaa
aaagaagaaaaaccttttaaagaagaagcgaatgaagagggtcgtagaacccgcagccct
cgcaaccgtaatgaacgagaacaacgccctgaacgtgcagaacgctcagaacgtgcgcct
gctaaaccgcgcgcagaacgcccagaaagagccgaacggacagaaagaggtgatgcaccc
agtggggctatgatgcgttatcgcattgaagttggtcggacacatggtgcgcaacctaaa
catattgttggcgcgattgctaacgaagcaggtttagacagcaacaatatcggacaaatc
aaactgtatgacacttacagcacagtcgatttgcccgaaggaatgccaaaagacgtattt
caacatctgcaaaaagtttgggtatgtggacagcaattacgtgtatccgtagacacagac
ggcgcagcacctgcccccgcgcctagcagagcaagaagcagcgaacctcggacgacaaaa
ccgcgcgctgataaacctcgcacaagaacaaccagcctaacaagtagcaccgacaaaccc
cgtagcaaaacgggtggtgatacgttaagaattaagcgtacaaagaaagtagattag
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