Beggiatoa leptomitoformis: AL038_11265
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Entry
AL038_11265 CDS
T04090
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep00300
Lysine biosynthesis
blep00470
D-Amino acid metabolism
blep01100
Metabolic pathways
blep01110
Biosynthesis of secondary metabolites
blep01120
Microbial metabolism in diverse environments
blep01230
Biosynthesis of amino acids
Module
blep_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AL038_11265 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AL038_11265 (dapF)
Enzymes [BR:
blep01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AL038_11265 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ALG68179
UniProt:
A0A2N9YG66
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Position
2704906..2705745
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AA seq
279 aa
AA seq
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MRTLLPFTKMHGLGNDFIVINALTKPFSLTPLQIRYLANRHTGIGCDQLLVVEPPTQPMV
DFRYRIFNADGSEVQQCGNGARCFAKYVRDKNLTTKNLLHVETMAGIIHLHLRPDGNVTV
NMGKPRFLPTEIPFQAEETALFYPLEVDDRVYQISVVSMGNPHAILIVDNVRDAPVQTLG
AKIEQHPRFPERVNVGFMQILDKHQIRLRVFERGVGETFACGTGACAAVVAGQRAGLLNT
SVIVQLHYGQLHIEWAVNDTATVSMSGPATCVFEGTIEL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgcactttgcttccctttactaaaatgcacggattgggcaacgattttatcgttatt
aatgcgctgaccaagccattttcactgaccccattacaaattcgttatctcgctaatcga
catactggcattggctgtgaccaattattggttgtcgaaccgcccacccagccaatggtt
gattttcggtatcgaatttttaatgccgatggctcggaagtgcaacaatgtggaaatggt
gcgcgctgttttgctaaatatgtacgagataaaaacttaaccactaaaaacttgctgcat
gtcgaaacgatggcaggtattattcatttacatttacgcccagacggtaatgtcaccgtt
aatatgggcaaaccccgtttcttgcccacagaaatcccgtttcaagcagaagaaaccgcc
ttattttatcccttagaagttgatgatcgagtttatcaaatcagcgttgtttctatggga
aaccctcatgctattttgattgttgataatgttcgtgatgcccctgtacaaaccctaggt
gcaaaaatcgagcaacatccacgttttcctgaacgtgttaatgtcggttttatgcaaatt
ttagataaacatcaaatccgtctgcgggtttttgaacggggggttggcgaaacatttgcc
tgtggtacaggtgcgtgtgcggctgtcgtcgcaggacaacgggcgggattactcaataca
tctgtaattgtacagttgcattatggacaattgcatattgaatgggcagtcaacgatacc
gcaacggttagcatgagtggtcctgcaacctgtgtttttgaaggaacaattgaattatga
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