Beggiatoa leptomitoformis: AL038_12470
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Entry
AL038_12470 CDS
T04090
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL038_12470 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blep03400
]
AL038_12470 (uvrB)
DNA repair and recombination proteins [BR:
blep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL038_12470 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AL038_12470 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_19
AAA_22
FtsK_SpoIIIE
AAA_7
AAA_16
UB2H
Motif
Other DBs
NCBI-ProteinID:
ALG68374
UniProt:
A0A2N9YFN6
LinkDB
All DBs
Position
complement(2976024..2978036)
Genome browser
AA seq
670 aa
AA seq
DB search
MSNPFKLQTTYTPSGDQPTAIRQLIAGLQQAHRHQVLLGVTGSGKTFTVANVIQSLQRPT
LILAPNKTLAAQLYSEMRDFFPHNAVEYFVSYYDYYQPEAYVPSSDTYIEKDASINEHIE
QMRLSATKAMLERPDAIIVASVSAIYGLGDPEWYMQMVLHLIQGEKAEQRFILRRLTELQ
YTRNDMVLERGMYRVRGDIIDIYPAESERDAIRVELFDDEVERLSYFDPLTGKVSRLVSR
LTIYPKTHYVTPRHVLLEAIDKIKAELKERLIFLRDKGKLVEAQRLEQRTIYDLEMIIEL
GYCSGIENYSRYLSQRDIGEPPPTLFDYLPENGLLIIDESHVTVPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEKLAPQTIYVSATPSQYELEHAQQVVEQVVRPTGLIDP
LVEVRPVAIQVDDILSEIKQRVVVQERVLITTLTKRMAEDLTDYLADNGVKVRYLHSDIE
TVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAIFDADKEGFLRSDKSLIQTVGR
AARHLNGKAILYADKITGSMQRAMAEMDRRRAKQLEHNQENGITPRQVDKAIRDIIDGVH
AAIPTADNNARGYSIAEETSAYLRLTPAQITKQIKQLQKEMYKQAENLAFEQAAAIRDQI
KQLQRSQIEL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccctttaaattacaaacaacttatacccctagcggtgaccagccaacggca
attcgccagttaattgcaggattgcaacaggcgcatcgacatcaggtgttactcggtgtg
acggggtcgggtaagacgtttacggttgctaatgttattcaatctttacagcgtcctact
ttgattcttgctcctaataaaacgcttgctgctcagttgtatagcgaaatgcgcgatttt
tttccgcataacgcggttgagtattttgtgtcttattatgattattatcagcctgaggct
tatgtgccgtcttctgatacttatattgagaaagatgcgtctattaatgaacacattgag
caaatgcgtttatccgcaactaaggcgatgttagagcgacctgatgcgattatcgttgcg
tctgtatcggctatttatgggttaggtgacccagaatggtatatgcagatggttttacat
ttgattcagggagaaaaagctgaacagcggtttattttgcgacgtttgacggaattgcaa
tatacgcgtaatgacatggtgttagagcggggaatgtatcgtgtgcgtggggatattatt
gatatttatcctgcggaatcggagcgcgatgctatccgtgtagagttgtttgatgatgaa
gtagaacgtttaagttattttgacccattgacgggtaaagtttcgcggctagtctcacgg
ttgacgatttatcctaaaacgcattatgtgacaccgcgccacgtgttgcttgaggcgatt
gataagataaaagcggagttaaaagaacgcttaatatttttacgggataagggaaaatta
gtagaggcgcaacgtttagaacagcgaacaatttatgatttagaaatgattattgagcta
ggttattgttcgggtatagaaaattattcgcgctatttgtcgcagcgtgatatcggcgaa
ccgccacccactttgtttgattatttgccagaaaatggtttgttaatcattgatgaaagt
catgtgactgtgccacaaattggtggtatgtatcggggcgaccgcgcacgaaaagaaact
ttagttgaatatggttttcgcttgccttcagcgttagataatcgccctttaagatttgag
gaatttgagaaacttgcaccacagactatttatgtgtccgctacgcctagccaatatgag
ctagaacatgcgcaacaagtggttgagcaagtggtgcgtccaacggggttgattgaccca
ttggttgaggtgcgtcctgttgcgattcaggtggatgatattttatccgagattaaacag
cgggttgttgtgcaagaacgggtgttgattacgacgttaaccaagcggatggcggaggat
ttaacggattatttagccgataatggcgtgaaagtacggtatttacattcggatatagaa
accgtagagcgggttgaaattattcgtgatttgcgtttaggagtgtttgatgttttagtg
ggtatcaatttattgcgcgaaggcttggatatgcccgaagtgtctttagtcgctattttt
gacgcggataaagagggatttttacgttcagataagtcattaattcaaactgttggacgt
gccgcacggcatttgaatgggaaagccattttatacgcggataaaatcacaggttctatg
cagcgcgcaatggcagaaatggacagacgacgtgcgaagcagcttgaacataatcaggaa
aatggcataacaccccgtcaggtagataaggcgattcgagatattatcgatggtgtacat
gccgcaataccaacggcagataataacgcacggggatattctattgctgaagaaaccagt
gcttatttacgcctaacacccgcacagattaccaagcagattaagcagttacaaaaggaa
atgtataaacaggcggaaaatctggccttcgaacaggctgcagcaattcgtgaccagatt
aaacagttacaacgcagtcagattgaattgtaa
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integrated database retrieval system
