Beggiatoa leptomitoformis: AL038_13365
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Entry
AL038_13365 CDS
T04090
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
blep
Beggiatoa leptomitoformis
Pathway
blep03030
DNA replication
blep03410
Base excision repair
blep03420
Nucleotide excision repair
blep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL038_13365 (polA)
03410 Base excision repair
AL038_13365 (polA)
03420 Nucleotide excision repair
AL038_13365 (polA)
03440 Homologous recombination
AL038_13365 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blep03032
]
AL038_13365 (polA)
03400 DNA repair and recombination proteins [BR:
blep03400
]
AL038_13365 (polA)
Enzymes [BR:
blep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL038_13365 (polA)
DNA replication proteins [BR:
blep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AL038_13365 (polA)
DNA repair and recombination proteins [BR:
blep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AL038_13365 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL038_13365 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_GTF3C1_N
Motif
Other DBs
NCBI-ProteinID:
ALG68506
UniProt:
A0A2N9YFF3
LinkDB
All DBs
Position
3190848..3193544
Genome browser
AA seq
898 aa
AA seq
DB search
MTTQNTLILVDGSSYLYRAFHAMPSLNNSEGMPTGAVYGVTNMLRNLLKEYQPTHAAVIF
DAKGDTFRHELSADYKATRPPMPPELVEQIAVIHQIVQALGFPLLSVAGVEADDVIGTLA
QQAEKAGMEVLIFTGDKDLAQLVNEHITLINTMNNTRLDPQGVKEKFGVTPAQIIDFLSL
VGDKVDNVRGVDKVGEKTAAKWLEQYTSLDTIIANSAQIKGKVGENLRAALHYLPLTKAL
ITIRCDVPLSETPQTLTLKTSDNTSLRQIYQTLEFKNWLHELPTEATLIAATAPITRDRH
YQCILTETELQTWLKRLAQVTTFAFDTETDGLDYLQAQLVGLSFALQADEAIYIPVAHDY
MGAPPQLSRERVLQLCKPLLENPTIGKIGQNIKFDAHILANNNIQLQGIAYDSLLESYVL
DSTRPHDMDSLALAHLNIKTTTFEEVAGKGAKQLRFNQVSLEIATDYAAEDADVTWQLHR
KLWADLQTTPSLQAVFTDIEMPLIPVLLQMERNGVMIDADKLYAQSNELASRLQTLEIQA
HEQAGMVFNLNSPKQLQTILFEKFNLPILEKTPKGQPSTAESVLQELAHDYPFPALILEH
RTLSKLKSTYTDALPQQIKARTGRVHTSYQQAVTTTGRLSSTEPNLQNIPIRTLEGRRIR
QAFVAPKGFKIVAADYSQIELRIMAHLSQDAGLLKAFSLGEDIHRATAAEVFGVPLADVS
TTQRRNAKAINFGLIYGMSAFGLGKQLEIGRTEAQSYIDAYFARYPDVKKYMEETQAQAH
EQGYVETVFGRRLYLPEINARNHQRRQYAERTAINAPMQGTAADIIKKAMIALHTWTVEN
PARVKMIMQVHDELVFEVADDFIEAACETIRQLMCSVAILRVPLLVEIGVGNNWDEAH
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgacaacccaaaatacgcttattctcgtcgacggttcttcctacttataccgcgccttt
catgcgatgccatccttaaataactcggaaggaatgccgacaggggcagtatatggggtt
acaaacatgttacggaatttattaaaagaatatcaaccaacccatgccgccgtgattttt
gacgcaaaaggcgatacctttcgccatgaattatctgctgattataaagccacccgccca
cccatgccgcccgagttagtcgaacaaattgcagttattcatcaaattgtgcaagcactg
ggttttccactgttatcggtagcgggggtagaagccgatgatgtgattggaacattggca
caacaagcagaaaaagcaggcatggaagtattaatttttacaggtgataaagacttagca
cagctagtgaatgaacatattaccttaattaatacgatgaataacacccgcttagacccg
caaggggtaaaagaaaaatttggggtgacacctgcacaaatcattgattttttaagtttg
gttggtgataaagtagataatgtgcgcggtgtggataaagtcggcgaaaaaacagcggca
aaatggctagaacaatacacgtcgttggacactattattgcaaatagcgcgcaaattaaa
ggcaaagtcggcgaaaatctacgcgctgcattgcattatttacccctaacgaaagcatta
ataaccatacgttgtgatgtccctctcagcgaaacgccacaaacattaacactcaaaacc
agtgataacacaagcttacgtcagatttatcaaacattagaatttaaaaactggttacac
gaactacccacagaagcaacactgattgctgcaaccgccccgattacgcgcgataggcat
tatcagtgcattttaacagaaactgaattacaaacatggcttaagcggttagcccaagtc
accacttttgcatttgatacagaaaccgatggattagattatctacaagcccaattagtt
ggactatcgtttgcgttacaagcggatgaggcaatttatattcctgtcgcacacgactac
atgggcgcgccaccacaactcagccgtgaacgagtattacaactttgcaaaccattacta
gaaaacccaaccattggcaaaattggacaaaatattaaatttgacgcgcacattttggca
aataataacattcaattacaaggcattgcttacgatagcttattagaatcttatgtgcta
gacagcacgcgcccgcacgatatggattctctagccctcgcacatctcaatattaaaacc
acgacttttgaagaagtagcgggcaaaggagcaaaacaattacgttttaaccaagtttct
ttagaaattgcaacggattacgcggcagaagatgcagatgtgacatggcaattacatcgc
aaattatgggcagatttacaaaccacccccagtttacaagcggtattcaccgacatagaa
atgcccttaattcctgttttattacaaatggaacgcaacggcgtaatgatagatgcagac
aagctttatgcacaaagtaacgaactcgccagccgtttacaaaccctagaaatccaagcg
catgaacaagcaggcatggtctttaatcttaattcgcctaaacaattacaaaccatttta
ttcgaaaaattcaatttgcccattttagaaaaaaccccaaaaggacaaccctctaccgct
gaatctgtgctgcaagaattagcacatgattatccctttcccgcgctgattttagaacac
cgcaccttaagcaaattaaaatcaacttataccgacgcgctaccgcaacaaattaaagca
cgcacagggcgtgtgcatacatcttatcagcaagccgtaacaacgacagggcggttatct
tcaactgaacccaatttgcaaaatatccccattcgcacgcttgaaggtcgccgtattcgt
caagcctttgtcgcacccaaaggatttaaaattgtcgcagcggattattcacaaattgaa
ttgcggattatggcgcatttgtctcaagatgcaggcttattaaaagcctttagtttgggt
gaagatattcaccgcgcaacggcagcagaggtatttggcgtacccttagccgatgtcagc
accacacaacgacgcaatgcaaaagcgattaatttcggtttgatttatggcatgtctgcg
tttggtctgggcaaacaattagaaattggacgcacagaagcccaaagttatatcgatgcc
tattttgctcgctatcctgatgttaaaaaatacatggaagagacgcaagcccaagcgcat
gagcagggttatgtagaaacggtattcggacgacgtttatatttacctgaaatcaatgca
cgcaatcatcaacgccgtcaatacgctgaacgcaccgcgattaacgcgcccatgcaagga
actgccgccgatattattaaaaaagccatgatagccttgcatacgtggacagtggaaaat
cccgcgcgtgtaaaaatgattatgcaagttcatgatgaattagtttttgaagtggctgat
gattttattgaggccgcttgtgaaacgattcggcaattaatgtgttctgttgcaatattg
cgtgtgccattgttggtagagataggggtaggaaataattgggatgaagcacattag
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