KEGG   Beggiatoa leptomitoformis: AL038_15300
Entry
AL038_15300       CDS       T04090                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
blep  Beggiatoa leptomitoformis
Pathway
blep03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:blep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AL038_15300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blep03400]
    AL038_15300
Enzymes [BR:blep01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     AL038_15300
DNA repair and recombination proteins [BR:blep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AL038_15300
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 OB_YrrC UvrD_C_2 SH3_13 Viral_helicase1 HHH_5 AAA_11 Helicase_RecD SLFN-g3_helicase PIF1 AAA_22 NTPase_1 nSTAND3 MeaB AAA_16 AAA RsgA_GTPase T2SSE NPHP3_N ABC_tran HHH_2 SRP54 UvrD-helicase AAA_5 NACHT AAA_29 MobB AAA_28 AAA_14 cobW TrwB_AAD_bind UvrD_C DEAD ATP_bind_1 TsaE NB-ARC Mg_chelatase Herpes_Helicase CbiA MMR_HSR1
Other DBs
NCBI-ProteinID: ALG68814
UniProt: A0A2N9YEA3
LinkDB
Position
3613330..3615591
AA seq 753 aa
MSTSSTPTQQTEHLQGSIERVTFHSSETGFCVLRVKVRGQRDLVTVIGSAPNVASGEYIE
AQGQWTIDRTHGLQFKTQQLRTVPPTTREGIEKYLGSGMIKGIGEHFAKKLVAAFGEQVF
DVIENHPERLLELTGIGKKRHDQVVKAWAEQKVVRDIMVFLQSHGVGTARAVRIYKTYGD
DAIAKVLENPYQLALDIHGIGFKSADTIAQHLGIPKDSLIRARAGVRHVLQELSSEGHCA
SYYTTLLTQAEQLLDIPESILSQAIQAELEENQLITEKINGESCLFLPALYRAEQGTANH
LKRLMQGICTWQGIEADKAITWVEEKNSLQLSASQKQAIQLALISKVLIITGGPGVGKTT
LVNSILKIISAKNLRITLCAPTGRAAKRLSESTQREAVTIHRLLAFDPQTGNFRHNSDNP
LPTDLLVIDEASMVDIILMNQVLRAIPDPAGVLIVGDVDQLPSVGPGTVLADIINSHTVP
VVRLTEIFRQAATSQIILNAHRVNKGIMPKLPEKPNTKADKPQTNNYKIQETSNIYKATS
VESPLQDFYLITAETPEEISAKLLHVVTERIPRRFHYDPIREIQVLTPMQRGGLGARSLN
IELQQRLNPTNTPRIERFGWTFAPQDKIIQTVNNYEKEVFNGDIGTIQEIDEVAGEAAIL
FDGRLVIYSLDELDEISLAYATSVHKSQGSEYPCVVIPIAMQHFMLLERNLIYTAITRAK
SLVVLIGQVQALAMAVKGQKAEKRLTNLISRLS
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgtccacatcctccacacctacccaacaaaccgaacacctacaaggcagtattgaacgt
gtcacctttcacagctcagaaacaggtttctgtgtactacgggttaaagtacgtggacaa
cgtgatttagtcaccgttatcggtagcgcgcccaatgttgccagcggagaatatattgaa
gcacaaggacaatggacaatagaccgcacccacggactacaatttaaaacccaacaactg
cgcactgttccccccaccacccgcgaaggcatcgaaaaatacctaggttcgggcatgata
aaaggcatcggagaacactttgccaaaaaactcgttgctgctttcggtgaacaagttttc
gacgtgattgaaaaccatcccgaacggcttttagaactcacaggtattggcaaaaaacgc
catgaccaagtcgttaaagcatgggcagaacaaaaagttgtccgcgacatcatggttttt
ttacaatcgcacggggtcggtacagcccgcgcggtacgcatttataaaacctatggcgat
gatgccattgcaaaagtcctagaaaatccctaccaactcgccttagatatacacggtatt
ggctttaaaagtgccgacaccatcgcccaacatttaggcattccaaaagattcactgata
cgcgcccgtgcaggcgtgcgccatgttttacaagaactctcaagcgaaggacattgtgcc
agctattacaccaccctattaacccaagcagaacaactgctcgacattccagaatccatt
ttaagccaagccatccaagcagagcttgaagaaaatcaacttattacagaaaaaattaac
ggcgaatcctgtttattcctccccgcgctctaccgtgctgaacaaggcacagccaaccac
ttaaaacgcctaatgcaaggcatctgcacatggcaaggcatagaagccgacaaagccatt
acatgggtagaagaaaaaaacagtctgcaactctccgcctcacaaaaacaagcgattcaa
ctcgcactaatcagcaaagtcctcattattacaggcgggccgggagtcggtaaaaccaca
ctggtgaatagcatattaaaaatcatcagtgcaaaaaatttacgcatcaccctctgcgcc
cccacaggacgcgccgctaaacgcttaagcgaatccacccagcgcgaagctgttaccatc
caccgcctacttgcctttgacccccaaacaggtaattttcgccacaatagcgataatcca
ttaccgacggatttactcgttatcgacgaagcctcaatggttgacattatacttatgaat
caagttttaagagcgattccagaccctgcgggcgtgcttatcgttggcgatgttgaccaa
ctcccctccgtcgggccgggaacagtgttagccgacatcatcaattcccacaccgtaccc
gtcgtgcgtttaaccgaaattttccgccaagctgcaacctcacaaatcattctcaatgcc
caccgtgtcaataaaggcatcatgccaaaattgcctgaaaagcccaacaccaaagcggat
aaaccccaaaccaacaactataaaatacaagaaacatcaaatatttataaagccacttct
gtagaatcaccgctccaagacttttacctgataactgctgaaacacccgaagaaatcagc
gcgaaactcctacacgtcgtcacagaacgcattccccgccgttttcactacgacccaatt
cgagaaatacaagttttaacccccatgcaacgcggtggcttaggggcgcgcagtttaaat
atagaattacaacaacgcctaaacccaaccaacacccccagaattgaacgctttggctgg
acattcgccccccaagataaaatcatacaaaccgttaataattatgaaaaagaagtattt
aacggcgatataggcacaattcaagaaatagacgaagtcgcgggcgaagccgctatttta
tttgatggtcggctagtcatttatagccttgatgaactggatgaaatttctttagcctac
gcaaccagcgtgcataaatcgcaaggctcggaatatccctgcgtcgtgatacccatcgcc
atgcaacactttatgttattggaaagaaacttaatttacactgccatcacgcgcgcaaaa
tcgctcgttgtcctcatcggacaagtgcaagcccttgctatggcagtaaaagggcagaaa
gcggagaaacggttgacgaatttaatcagtcgcttgagttag

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