Beggiatoa leptomitoformis: AL038_16535
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Entry
AL038_16535 CDS
T04090
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blep
Beggiatoa leptomitoformis
Brite
KEGG Orthology (KO) [BR:
blep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blep03016
]
AL038_16535 (truB)
Enzymes [BR:
blep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AL038_16535 (truB)
Transfer RNA biogenesis [BR:
blep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AL038_16535 (truB)
Prokaryotic type
AL038_16535 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ALG69003
UniProt:
A0A2N9YDN8
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All DBs
Position
3875647..3876582
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AA seq
311 aa
AA seq
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MSKPRRPRRPVHGIILLNKPLGISSNHALQRVKHLFQAEKAGHTGSLDNLATGLLPICLG
EATKLSSFLLEADKSYRAECTLGKTTTTGDAEGDILQERSIDTLDLARIQTIIPQFLGEI
QQVPPMYSALKHQGQPLYRLARQGISIERPARAVTIYAIEIISFQENRLTIEIRCSKGTY
IRTLAEDMGEALGCGAYISALHRIGVGQYQTMLDMDTLTEAAAQGQTALDACLQPLYSAL
PWWSTVCLSAQQAAAIQHGQAVSLAHDIPVQTWVKLLTTPTPRCDKTDFLGLGEVLADGR
IAPRRVFNWLD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccccgcagaccccgccgtcctgtacatggcattattttgttaaataagcct
ttaggtatcagttctaaccatgcgttacagcgggttaaacatttattccaagcagaaaaa
gcaggacatacaggaagcttagataatttagccacagggttattaccgatttgtttaggc
gaggccacaaagttatcgagctttttattagaagcggataaaagctatcgcgcggaatgt
actttgggtaaaaccaccacgacaggcgatgctgaaggcgatattttacaagagcgttca
atagatacgcttgatttggcacgtattcaaaccattatcccgcagtttttaggcgaaatt
cagcaagtaccgccaatgtattctgcattaaaacatcaggggcaaccgctgtatcgtttg
gcacgacagggaatcagtattgagcgaccagcacgagcggtcacgatttatgcgattgag
attatttcttttcaagaaaatcgcctgacaatagaaatccgttgttctaaaggcacgtat
attcgcacacttgcagaggatatgggggaggcgttgggttgtggtgcgtatatcagtgcg
ttacaccgtatcggcgtagggcaatatcaaacaatgctcgatatggacacactaacagag
gccgccgcacaggggcaaacggcgttagacgcatgtttacagcctttgtacagtgcgttg
ccatggtggtcaacggtctgtttatctgcacaacaggcagcggctattcagcatgggcag
gcagtcagtttagcgcatgatatacctgtgcaaacatgggtaaagttgttgacaacacct
acaccccgttgtgataaaacggattttttaggattaggtgaggtcttagctgacggacga
attgcgccacgtcgggtatttaattggttggattaa
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