Bifidobacterium longum subsp. infantis 157F: BLIF_0006
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Entry
BLIF_0006 CDS
T01420
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blf03032
]
BLIF_0006
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_0006
Enzymes [BR:
blf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BLIF_0006
DNA replication proteins [BR:
blf03032
]
Prokaryotic type
DNA Topoisomerases
BLIF_0006
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLIF_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FUSC
Motif
Other DBs
NCBI-ProteinID:
BAJ70153
LinkDB
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Position
7435..10086
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AA seq
883 aa
AA seq
DB search
MADENNTGDEQFTPDGSMEPLSPQEADTTDYGLMDTGERIQRKDLQQEMRESYLAYALSV
IVERALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYNKCSRVVGDVMGKYHPHGDSAIYDT
LVRMAQSWSMRNMLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFVPN
YDGKTQEPTVLPARFPNLLVNGSAGIAVGMATNIPPHNMREVADGVHWALDHPDASREEL
LENLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEINGRMCLVVTELPY
QVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHSQ
LQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLDVIARRTAYLKREAEERDHILQGYLK
ALDMLDEVIALIRASEDTDTARTGLMGLLDIDQVQADAILAMQLRTLTRMNRDKIVAEHE
ELQRKIADYIDILAKPERQRKIIGDELDEIVAKYGDDRRTKILPFSGEMNVEDLIAEENV
VVTVTHSGFIKRTKADEYRSQHRGGKGIKGTKLREDDVVDHFFLTSTHNWLLFFTNKGRV
YRIKAYELPEGSRDSKGQHVANLLQFAPDESIQTVLSIPNYEVAKYLVLATRSGKVKKTP
LAEYDSPRQGGLIAVRLMADENGENADELIGAALCNAEDDIILVSKLGMSLKFQADDEQL
RPMGRQTAGVQGMKFRNDDSLLAMDVVPGDSDKDLFVVTNEGFAKRTAISEYRLQGRNGL
GIKAVQLVEGRGALVGALVVSEDDQVMAIMKSGKVIRSNVDEVKRTGRNTQGVTFAKPDK
GDTILSIARNEEKDEPEDGGDAAANGTAETAQSGENVNNADEA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatgaaaacaacaccggcgacgagcagttcacgccggacggctcgatggagccg
ttgagcccgcaggaggcggacactaccgactacggcctgatggacaccggcgaacgcatc
cagcgcaaggacctgcagcaggagatgcgcgagtcctatctggcgtatgccctctccgtg
atcgtcgagcgcgccctgccggacgtgcgcgacggtatgaagcccgtgcatcgccgcgtg
atctacgcgatgtacgacggcggctaccgccccgatcgcggctacaacaagtgctcccgc
gtggtcggcgacgtgatgggtaagtaccacccgcacggcgactccgccatctacgacact
ttggtgcgtatggcccagtcctggtcgatgcgcaacatgctcgtcgacggccagggcaac
ttcggctcccccggcgacgacccggccgccgccatgcgttacaccgaatgccgtatggcc
ccgctggccatggaaatggtgcgcgacatcgacaaggacaccgtcgacttcgtgcccaac
tacgacggcaagacccaggagccgaccgtgctgccggcccgcttcccgaacctgctcgtc
aacggctccgccggcatcgccgtcggcatggccaccaacatcccgccgcacaacatgcgc
gaggtggcggacggcgtccactgggcgctcgaccacccggacgccagccgcgaggaactg
ctggaaaacctgatccgcatcatcaagggaccggacttccccaccggcgccaccatcctc
ggccacaagggcatcgaacaggcctaccgcaccggccgtggcctgatcaccatgcgtgcc
gtggtcaacactgaggagatcaacggccgtatgtgcctggtggtcaccgaactgccctac
caggtcaacccggaccgcctcgtcgtctccattcgtgaggccgtgcgcgacggcaagatc
cagggcatcgccgacatgcgcgacgagacctccggccgtaccggccagcgcctcgtgctc
gtgctcaagcgcgacgccgtgccgaaggtggtcctgaacaacctgtacaagcactcccag
ctgcagcagaccttcggcgccaacatgctggcgctggtcgacggcgtgccgcgcacgctg
agcctggacgccttcatccgccattgggtgaaccaccagctcgacgtgatcgcccgccgc
accgcgtacctgaagcgcgaggccgaagagcgcgaccacatcctgcagggctatctgaag
gccctcgacatgctggacgaggtcatcgccctcatccgtgcctccgaagacaccgacacc
gcacgtacgggccttatggggctgctggacatcgaccaggtgcaggcggacgccatcctg
gccatgcagctgcgcacgctgacccgcatgaaccgcgacaagatcgtggccgagcatgag
gaattgcagcgcaagatcgccgactacatcgacatcctcgccaagccggaacgccagcgc
aagatcatcggcgacgagctcgacgagatcgtcgccaagtacggcgacgaccgccgcacc
aagatcctgccgttctccggcgagatgaacgtcgaagacctgatcgccgaagagaacgtg
gtggtcaccgtgacccactccggcttcattaagcgcaccaaggccgacgaataccgctcc
cagcaccgcggcggcaagggcatcaagggcaccaagctgcgcgaggacgacgtggtggat
cacttcttcctgacctccacgcacaactggctgctgttcttcacgaacaagggccgcgtg
taccgcatcaaggcctacgagctgcccgagggctcgcgcgactccaagggccagcacgtg
gccaacctgctgcagttcgcgcctgatgagtccatccagaccgtgctgtccatcccgaac
tacgaggtggccaagtatctggtgctcgccacccgttccggcaaggtcaagaagaccccg
ctggccgagtacgattccccgcgccagggcggcctgatcgccgtgcgcctcatggccgac
gagaacggcgagaacgccgacgagctcatcggcgccgcgctgtgcaacgccgaggacgac
atcatcctggtctccaaactcggcatgagcctcaagttccaggccgacgacgagcagctg
cgcccgatgggccgccagaccgccggcgtgcagggcatgaagttccgtaacgacgacagc
ctgctggccatggatgtggtccctggcgactccgacaaggacctgttcgtggtcaccaac
gagggcttcgccaagcgcaccgccatcagcgaataccgtctgcagggccgcaatggcctg
ggtatcaaggccgtgcaactggtcgagggccgtggtgctctggtcggcgcgctcgtggtg
tccgaagacgatcaggttatggccatcatgaagtccggcaaggtgattcgctccaacgtg
gacgaagtcaagcgcaccgggcgcaacacccagggcgtgacctttgccaagcccgacaag
ggcgacacgattctctccatcgcccgtaacgaggagaaggacgagcccgaggatggcggc
gatgccgcggcgaacggcaccgccgagaccgcacaatccggcgagaatgtgaacaacgcg
gacgaggcgtga
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