Bifidobacterium longum subsp. infantis 157F: BLIF_0764
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Entry
BLIF_0764 CDS
T01420
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Pathway
blf03420
Nucleotide excision repair
blf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BLIF_0764
03430 Mismatch repair
BLIF_0764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_0764
Enzymes [BR:
blf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLIF_0764
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLIF_0764
MMR (mismatch excision repair)
Other MMR factors
BLIF_0764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAJ70907
LinkDB
All DBs
Position
958211..960913
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AA seq
900 aa
AA seq
DB search
MYDEPEVIARSAQELVGDLNPQQAEAVQYRGQALLIGAGAGSGKTRVLTRRIAWILSQFG
AWPSQILAITFTNKAAAEMRERLGSLIGPVAQRMWVSTFHSACVRILRRDGKSIGLKSGF
SIYDSADSERLVKIIATEFNLDIKRYTPRSILGHISDLKNNLTGWKENLAVHAPDFTPGQ
RGYQFGTVGDLEAIYAVIYAEYEHRLALANAVDFDDLIGRTVELLRTDPAVAEYYHHRFR
YILVDEYQDTNHAQYVLVRELAGVDTGEKAIPGAPNAGKSGPAWITVVGDSDQSIYAFRG
ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVISNNEGRKPKKLWTALGKGEPI
VGYAADNAQQEAQWVATEIARLHAEAGIAYSDMAIMYRANAQSRSLEEALINTNQPYQLV
GGTKFYERREIKDALAYLQALVNPDDDVNLRRILNVPKRGLGDRAEGVLLAYAREHGTSF
FYALMHLDEIEVPTRTATSLRAFRDLMGALSQFTRAHDSKPSEIVAEVLEKSGLRAELEK
SVDPQDASRLENLSQLQSTAAEFEQNTPDATLSAFLETTALVADSDQLPGEAEDSGKVTL
MTLHTAKGLEYPVVFLTGMEQGTFPHSRSMEDTTELQEERRLAYVGITRAKQRLYVTRAA
VRSQWGQAADMMPSQFLDEIPDSLIDWKRREAGVERMRASWETDGFADDLGGWDDDDFGG
AAFGGSSTFGSRGSSGSGSSYGSRSRYGSSYGSGSGSSSYGSRSSSYGSRSGSSSYGSRS
RSGSSYGSSGSGSRSSYGSRSRSGSSSGSYGGTRGGKVTTRRTAPKSDSTGSAVPSSKLT
KDNGLNIADFAVGDMISHDQYGLGKVTDAQDKGRNSVITVDFGSAGVKRLMLRVAPIEKL
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgtacgacgagccggaagtcatcgcacgcagcgcacaggaactcgtgggcgacctgaac
ccgcagcaggcggaagccgtgcaataccgcggtcaggcgctgctgatcggagccggtgca
ggctccggcaaaacccgcgtgctgacccgccgcatcgcctggatcttgagccagttcggc
gcatggccgagccagattctagccatcaccttcaccaacaaggccgccgccgaaatgcgc
gaaagactcggctcgctgatcggcccggtggcccagcgcatgtgggtctccaccttccac
tccgcctgcgtgcgcattctgaggcgcgacggcaagtccatcggactcaagtccggcttc
tccatctacgattccgccgactccgagcgactcgtcaaaatcatcgccaccgaattcaac
ctcgacatcaagcgctacactccacgctcgattctcggccatatctccgacctcaagaac
aatctgaccggttggaaggaaaacctcgccgttcacgcgcccgacttcacgcccggccag
cgcggctaccagttcggcacggtgggcgaccttgaagccatctacgcggtgatctacgcc
gaatacgagcatcgcttggccctggccaacgccgtcgacttcgacgatctgatcggccgc
acggtcgagttgctgcgcactgacccggccgtcgccgagtactaccatcaccgcttccgt
tacattctggtcgacgagtatcaggacaccaaccacgcccagtacgtgctcgtgcgcgag
ctggccggcgtggacacgggggagaaggccatcccgggcgcgcctaacgccggcaagtcc
ggccccgcctggatcaccgtggtgggcgattccgaccagtccatctacgcgttccgtggt
gccgacatccgcaacattcaggacttcgagcaggacttcccgaacgccaagaccatcatg
ctcgaacagaactatcgttcgacgcagaccattctggatgcggccaacgcggtgatcagc
aacaacgagggccgcaagcccaagaaactgtggaccgcgctcggcaagggcgagccgatc
gtcggctacgcggcggacaacgcccagcaggaggcccagtgggtggccaccgaaatcgcg
cgcctgcacgccgaagcgggcatcgcctactccgacatggcgatcatgtaccgcgccaac
gcccaatcccgctcgctcgaagaggcgctgatcaacacgaatcagccgtatcagctcgtc
ggcggcaccaagttctacgaacgtcgcgaaatcaaggatgcgctggcctatttgcaggcg
ctcgtcaatccggacgacgatgtgaatctacgccgtattctcaacgtgcccaagcgtggg
cttggcgaccgcgccgaaggcgtgctgctcgcctacgcgcgcgagcatggcaccagcttc
ttctacgcactcatgcacttggatgagatcgaggtgccgacacgcaccgccacctcgcta
cgagcattccgcgatctgatgggcgcgctctcgcagttcacgcgcgcgcacgactccaag
cccagcgagatcgtggccgaagtattggagaagtcgggcttaagggccgaactcgagaaa
tccgtggacccgcaggacgcctcccgtctggagaacctctcccagctgcagtccactgcc
gccgaattcgaacagaacacgcctgacgccacgttgtccgcattcctggagaccaccgcg
cttgtggccgactccgaccaactacccggcgaggcggaggactccggcaaggtgacgctt
atgaccttgcacaccgccaagggcctcgaatacccggtggtgttcctgaccggcatggaa
cagggcaccttcccgcattcgcgttcgatggaagacaccactgaactgcaggaggaacgc
cgactcgcctatgtgggcatcacgcgcgccaagcagcgactgtatgtcacgcgcgccgcc
gtccgctcccagtggggccaggccgccgatatgatgcccagccagttcctcgacgagatt
ccggattcgctgattgattggaaacgccgtgaagccggcgtggagcgtatgcgcgccagc
tgggagaccgatggattcgccgacgatttgggcggctgggatgatgacgatttcggcggc
gccgcgtttggcgggtcgtcgacgttcggctcgcgtggttcgtccggttcgggttcgtcc
tatgggtcgcggtcgcggtatgggtcgtcgtatggctcgggttccggctcttcgtcgtat
ggttcccgttcatcgtcgtatggttcccgctccggctcgtcctcctatggttcccgctcc
cgttcgggttcgtcctatggttcttcaggctccggttcgaggtcgtcctacgggtcgcgt
tcccgttccggttcttcgtccggttcatatggtggcacccgtggcggcaaggtcaccacg
cgccgtaccgcaccgaaatccgattcgaccggctctgccgtgcctagctcgaagctcacc
aaggacaatggcctgaatatcgccgacttcgccgtgggcgacatgatcagccacgaccag
tacggtctcggcaaggtcaccgacgcacaagacaagggccgcaattcggtaatcaccgtg
gacttcggctccgccggcgtcaaacgcctcatgctccgcgtagcgccgattgagaagttg
tag
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