KEGG   Bifidobacterium longum subsp. infantis 157F: BLIF_1210
Entry
BLIF_1210         CDS       T01420                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
blf  Bifidobacterium longum subsp. infantis 157F
Brite
KEGG Orthology (KO) [BR:blf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:blf03400]
    BLIF_1210
Enzymes [BR:blf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BLIF_1210
    5.6.2.6  RNA 3'-5' helicase
     BLIF_1210
DNA repair and recombination proteins [BR:blf03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BLIF_1210
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII DUF6406 Cas3-like_C_2 PhoH
Other DBs
NCBI-ProteinID: BAJ71350
LinkDB
Position
complement(1392058..1396791)
AA seq 1577 aa
MYESLSLFSEPTKMWFEHAFGQPTEAQAQAWPAIHSGRNVLVIAPTGSGKTLAAFLSAID
RLMTVPRTRRAGVRVLYISPLKALAADVAKNLEQPLEGIAAQCEAQGLPVPKIAVATRSG
DTTAQERRRIASHPPDILVTTPESLYLLLTSKAGRILGTVDTVIVDEIHAVAGTKRGAHL
AVSLERLENLVAESRKRDAIDADADEGGDAAVDAGRGDRHMQRIGLSATVNPPEKAARFL
GGGQPVTIVNPGGRPAMDLRMIEPLENMRDLQSVNAKQRVGGVDAERSAPHISGVTPAMQ
RLAERRGIVPVDDRDVSSTSGDDSDASDEFDSSALVGAAGDRTSGSIWPVVERSILDEIL
AHRTTLVFVNSRGVAEKLTARLNDLYAQTRHGTNPDTVRDPGSPEGREGFSTHYDAVVGS
TTMLVGSHEGDDVIAMAHHGSVSKDRRKMIEERLKRGELRCVVATSSLELGIDMGSVDLV
IQVDTPLSVSSGLQRVGRADHQVGGVSHALFYPLTRQQIVTGAASLEAMIAGDIEPLAVP
RNPLDILAQQTVAAAAMHDLNADDWYATVRRAAPFAELPRDMFDAVIGMMSGEYNSEEFS
AFRPRLVWNRDNGLISARPGSQKVAVTSGGTIPDRGLYTVVLPEADAGKGQRRVGELDEE
MVYESRVGDVITLGTSTWQIQDITRDRVVVTPAPGRTARLPFWHGEGSGRDYGFSRTIAR
FTREIAAGLDMRRTEGRSAVEGSAVPTFIPTILTRLHHDGLDANAITNLARLLSEQQAAT
GAVPSDQTLIVERTRDEDGGWRIVLLSPFGRRVHEPWSMAISRRLRQRYGFDGQVYAADD
GIVIQLPDGDGHIPAQDLFLFDPEDLKADVERQVGESVLFAARFRECAARSLFMPRSDPG
RRVPLWQQRLRAAQLLQSARMAKNFPLLLETARECLQDVYDMPALNEVMTGLQAGTITVK
DVETESPSPFAENILFGFVGVVMYQYDQPQAERSAQLLSLDPHVLERLLGTTDMAQVLNP
DVIREVEQELGEHTFWNELADDDVTGRVTRYAKTHGPFTADQLIADLHLDATDAVHTLDV
LAAKGELLQGHFVDDDEQGQQWLHKDVFRRIRSRSLAKARKAVKPVESEAFQMFLIDRQG
IGPVGGERYEGADGLMRVIEQLEGISLPTALWESAVFPARVRDYQPALLDELLTSGDVVW
VGSKTGGTSAMDPGEVAFYPADSILFSGVEHGTTSNASDATMPEAILTALDSGGAFHARQ
LMDAAKRAWNETAEPDINPNTGEIIPQEWSEQQFKDALWSLVWQGKVTNSSFAPVRALTA
GAASPRKSTTSRRRGRVAPIRRATTDMTLGGLWSAVIGQAEAEDTDQTERALALVETLLD
RYGVIAQPVIDKENIPGGYSALYPVLNRMEEHGRLVRGMFVRGFGAAQFAERDTVDALRH
PSEHRGQSVVALSVLDPANLSGSAIAWPDAPAGAGKPARRIGATVVLNAQGALLYAAAKA
KHLTAFDQSVGHEAAVNDSDEQMRKAATELAYALKRNGTGSVTFSDINGEPLNARHPFAR
ILHQSGFTPVPQGMRLY
NT seq 4734 nt   +upstreamnt  +downstreamnt
atgtacgaaagcctgagcctgttttccgaacccaccaagatgtggttcgagcatgccttc
ggtcagccgaccgaggcacaggctcaggcatggccggcaatccattccggtcgcaatgtc
ttggtcatcgcccctaccggttccggcaaaacattggctgcgtttctctcagccatcgac
cgattgatgaccgtgccacgcacgcggcgtgccggtgtgcgtgtgctgtatatctcgccg
ttaaaggcgctcgcggccgatgtggccaagaacctagaacagcctttggagggcattgct
gcacaatgcgaggcgcaagggctgcccgtgccgaagatcgcggtcgccactcgttcaggc
gacaccaccgcacaggagcggcggcgcatagcctcccatccaccggatatcctcgttacc
acgccagaatcgttgtatttgttgctcacttcgaaggcagggcggattctcggcactgtc
gatacggtgatcgtcgatgaaattcatgcagtggcgggcaccaagcgcggcgcacatttg
gcggtaagtctggaacggctggagaaccttgtcgcagaatcgcgcaagcgagatgcaatc
gatgcagatgctgatgagggcggtgatgccgccgttgatgctggccgcggcgatcgtcat
atgcagcgcattggtctatccgctacggtgaatccgcctgaaaaggcggcgcgattcctg
ggcggcgggcaaccggttaccatcgtgaatcccggtgggcggcctgcaatggatttgcgc
atgattgagccgttggaaaacatgcgtgatttgcagtccgtgaatgccaagcagcgtgtc
ggtggcgtggatgctgaacggtccgctccgcatatcagtggtgtcacgccggccatgcag
cgacttgctgaacgcaggggcattgtgccggtggatgatagagatgtttcttccacttct
ggggacgattctgatgcgagtgatgagttcgattcctccgcgttggttggagcggcgggc
gaccgtacctccggttccatttggcccgtggtggaacgcagtattttggatgagattctc
gcgcaccgcactacattggtgttcgttaattcgcgtggtgtggccgaaaagcttaccgcg
cgcttgaacgatctgtatgcgcagacccggcatggcaccaatcccgacactgtgcgggat
ccgggctctccggaaggccgcgaagggttctccacgcattacgatgctgtggtcggctcc
accaccatgcttgtcggctcacatgagggcgatgatgtcatcgccatggctcatcatggg
tcggtttccaaagatcgccgcaaaatgattgaggaacggcttaaacgtggtgaattgcgc
tgcgtggtggccacctccagtttggagctcggcattgatatgggctcggtcgacttggtg
attcaagtcgatacgccgttgtcggtctcctccggattgcagcgtgtaggccgtgccgat
catcaggtcggtggcgtctctcacgcattgttctatccgctcacccgtcagcagattgtc
actggggccgcaagtctggaagccatgattgccggcgatatagaaccattggccgtgccg
cgcaatccgctcgatattcttgcccagcagaccgtggccgctgccgcgatgcacgatttg
aacgctgatgactggtatgccacggtgcgccgtgctgcgccgtttgccgaactgccacgt
gacatgttcgatgcggtaatcggcatgatgtccggcgaatacaacagcgaggaattctcg
gcctttcggccgcgactggtatggaatcgggataatggcctgatttccgcccgtcccggt
tcgcagaaagtggccgttacctctggcggtacgattcccgatcgagggctgtacaccgtg
gtcctgcctgaggcggacgccggcaaaggccagcgtcgcgtcggcgagttggatgaggag
atggtctatgagtcgcgtgtgggcgatgtcattacactgggtacctccacatggcagatt
caggacatcacccgcgaccgtgtggtggtgacgccggctcccgggcgcaccgcacgtcta
ccgttctggcacggcgaaggttccggccgcgactacggtttcagccgtaccatagcccgt
ttcacccgagaaatcgctgccgggctagacatgaggcggactgaggggaggtctgccgta
gaggggtcagccgttccaaccttcatcccaacaatcctcacccgtctccaccacgacggc
ctagatgccaacgccatcaccaacttggcccgcctactctccgagcaacaagccgccact
ggtgcagtccccagcgaccaaacccttatcgtggagcgcacacgcgatgaagacggcgga
tggcgcatcgtgctgttaagccccttcggccgccgcgttcacgaaccgtggtccatggcc
atcagccgcagactgcgccaacgctacggtttcgacgggcaggtatatgccgccgatgac
ggtatcgtcattcagctaccggacggtgacggacatattcctgctcaagacctgttcctt
ttcgacccagaagacctcaaagcagatgtagagcgtcaagtgggcgagtccgtgctattt
gccgcacgattccgcgaatgcgccgcccgatcactgttcatgccgcgatccgacccgggc
cgtcgcgtgcccctatggcagcagcgactgcgcgccgcacagctcctgcaatccgcacgt
atggccaagaactttccgctgctgctggaaaccgcgcgcgaatgtttgcaagacgtatac
gacatgcccgccctgaacgaggtgatgaccggattgcaagccggcaccattaccgtgaag
gacgtggaaaccgagtcgccatcgcctttcgccgagaacattctctttggcttcgtcggc
gtggtgatgtaccagtatgaccaacctcaggccgagcgtagcgcgcaactgctgtctctc
gatccgcacgtgctcgaacgcttgctcggcaccaccgatatggcacaagtgctcaacccg
gacgtgattcgcgaagtcgaacaggaactgggggagcacactttctggaatgagcttgcc
gacgatgatgtgactggtcgcgtgacccgttacgccaaaacccatggtcctttcaccgcc
gatcagctcatagccgatctacacctcgatgctacggatgccgtgcacactctggatgtg
ctggctgccaaaggcgagttgctgcaaggccactttgtagatgatgacgagcaaggccaa
cagtggctccataaggacgtattccgccgtattcggtctcgctcattggccaaggcgcgt
aaagcagtcaagccagtagaatcagaggcgttccagatgtttcttatcgaccgacaaggt
atcgggccggtcggcggcgaacgatatgaaggtgctgacgggctcatgcgcgttatcgag
cagctggagggcatatcactgcccactgcactctgggagtcggcagtattccccgcacga
gtacgagactaccaacctgcattgctggatgagttgctgaccagcggcgatgtggtctgg
gtcggctcaaaaaccgggggaaccagtgcgatggaccccggtgaggttgctttctatccg
gcggattcaatattgttcagcggtgtggaacatggtacgacatcgaacgcctcagacgcc
accatgccggaagcgattctgaccgcactggactcagggggagcgttccatgcccgtcaa
ctgatggatgccgccaaacgtgcgtggaatgagaccgcggagccggacatcaatccaaac
accggcgaaatcattccgcaagagtggagcgaacagcagttcaaggatgccttgtggagc
ttggtctggcaaggtaaggtcaccaattccagcttcgcgccggtgcgtgcattaaccgca
ggcgcagcaagcccgcgtaaatccactacatcacgtcgtcgtgggcgtgtcgctccgatt
cgccgagccactacggatatgacgttaggaggtttgtggtccgccgtaatcgggcaagct
gaagccgaagacaccgaccagaccgaacgggcactcgcactggtcgagacgttgctggac
aggtatggcgtcatcgcgcagccggtgattgacaaggaaaatatcccgggtggctactca
gcgttgtatccggtattgaatcgcatggaggagcatggtcgactggtacgaggcatgttc
gtccgtggtttcggcgcggcccaatttgccgagcgcgacaccgtggatgcgttgcgtcat
ccgtcagagcatcgtggccagtccgtggtggcattgagtgtgctcgaccccgcaaatctc
agtggctccgccatcgcgtggccggacgcgcctgccggtgcgggtaaaccggcacgccgt
atcggagccacggtcgtgctcaatgcgcaaggcgcgctactatacgcggccgccaaagcc
aagcacctgacagcgttcgatcaatcggtcggccatgaagccgctgtcaatgattccgac
gaacaaatgcgcaaggccgccacagaactggcctacgccctcaaacgcaatggcaccggc
tccgtgacattcagcgacatcaatggcgaacccctcaacgcccgtcaccccttcgcccgc
atcctccaccagtccggcttcacccccgttccccaaggcatgcggctgtactga

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