Bifidobacterium longum subsp. infantis 157F: BLIF_1213
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Entry
BLIF_1213 CDS
T01420
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blf03032
]
BLIF_1213
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_1213
Enzymes [BR:
blf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BLIF_1213
DNA replication proteins [BR:
blf03032
]
Prokaryotic type
DNA Topoisomerases
BLIF_1213
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLIF_1213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAJ71353
LinkDB
All DBs
Position
complement(1399236..1401554)
Genome browser
AA seq
772 aa
AA seq
DB search
MPKEEYGAKDLAVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNSVDEALAGFCNDIV
VTLHTDGSVEVADNGRGIPVDKEPKTGLSGVEVVLTKLHAGAKFGNSSYNAVGGLHGVGS
SVVNALSSRLDVEVDRDGKTHHMTFHQGHPGVYTDADPANPSPDSPFKRTRKNRPTELEI
IGKVSPKTTGTRIRYWYDPEIFNKTAEFSYEQLIDRVRQTSFLVPGLKITIIDENVPETA
ATDTVEATDDVTVEPAQDQAPALDVSSDDAELFDDSAESQSDDAESPAEEDFSLTAGDQV
VDGAFGEQPAHPRVVEFLHTGGVKDFVDFLSKGEPISDIWRIQGEGTYKEETQAVGEGGE
LHAQEIERTCGVDIALRWVNGYDTTIMSFVNIVETPGGGTHVDGFMNAITKQIRKAVEDN
ARKLKVNMKDSAMKVERDDIQAGLVAVVTARVAEPQFQGQTKDVLGTAQVKPIVTRLTDK
QFGEMITGSKRGYKEQSGRVLEKIVGEMHARIQSRKAKEVTRRKNALESASMPAKLSDCQ
PGNDDVAELFIVEGDSALGTAKAARNAGFQALLPIRGKILNVQKASITQMLSNKECAAII
QVVGAGSGQSFDIEQSRYHKIIMMTDADVDGAHIRILLLTLFYRYMRPLIEHGYVYAAVP
PLHRIALTGSHKGEYIYTYSDDELAGKLADLDKKRIGYNDDIQRYKGLGEMDADQLADTT
MDPRTRMLRRIRMEDAAQASEIFSLLMGDDVPPRKQFIVDNADDFDRSKIDT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaagaatacggtgccaaggacctagctgttcttgagggcttggatgcggta
cgcaagcgtccgggcatgtacatcggcaccaccgactcgcaggggcttatgcactgcctg
tgggagatcatcgacaactccgtggacgaggccttggccggcttctgcaacgacattgtg
gtcaccctgcacaccgatggttccgtggaagtcgcggacaatggccgaggcatcccggtg
gacaaggaaccgaaaaccggcctgtccggcgtggaggtcgtactgaccaaactgcacgcc
ggtgccaagttcggcaattcgtcttataacgccgtcggtggcctgcacggcgtgggctcc
tccgtggtcaatgccctgagctcccgactggacgtcgaagtggatcgtgacggcaagacg
caccacatgaccttccaccaaggtcaccctggcgtatacacggatgccgacccggccaat
ccgtctcccgattccccgttcaagcgcactcgcaagaaccgacccaccgagctggaaatc
atcggcaaggtatctcccaaaaccactggtacccgtattcgctactggtatgatccggag
atcttcaacaaaaccgccgagttctcatacgaacagctcatcgaccgcgtgcgtcagacc
agcttcctggtgcccggcctcaaaatcaccatcatcgacgaaaacgtaccggaaacggcg
gcgactgacaccgtcgaggccactgatgacgtaacagtcgaacctgcgcaagaccaggca
ccggccttggatgtctcgtccgacgatgccgaactcttcgacgactccgccgaatcccag
tccgacgatgccgagagcccggccgaggaggacttctcgctgacggccggcgaccaggtc
gttgatggcgcgttcggcgaacagcccgcgcacccgcgcgtcgtggaattcctgcacaca
ggcggcgtcaaggacttcgtcgacttcctgtccaaaggcgagccgatctccgacatctgg
cgcatccaaggcgagggcacctataaggaggagacccaggccgtgggtgagggcggcgaa
ctgcacgcccaggaaatcgaacgcacctgcggcgtggatatcgccctgcgatgggtcaac
ggctatgacaccacaatcatgagcttcgtgaacatcgtggagacgcccggcggcggtact
cacgtggacggtttcatgaacgccatcaccaagcagattcgcaaggcggtggaagacaac
gcccgcaagctcaaggtgaacatgaaggactccgccatgaaggtggagcgcgacgatatc
caagccggactcgtggccgtggtcaccgcacgcgtggccgaacctcagttccaaggccag
accaaggacgtgcttggcaccgcgcaggtcaagccgatcgtcacccggctcaccgacaag
caattcggcgagatgatcaccggctccaagcgcgggtacaaggaacaatccggccgcgtg
ctggagaagatcgtcggcgaaatgcacgcacgcatccagtcgcgcaaggccaaggaggtc
acgcgccgcaagaacgcgctcgaatccgcctcgatgccggccaaactctccgactgccag
ccgggcaatgacgacgtggccgaactgttcatcgtcgagggtgattccgcactcggtacc
gccaaggccgcccgcaacgccggtttccaggcactgctgccgattcgaggcaagattctg
aacgtgcagaaggcgtcgatcacgcagatgctctccaacaaggagtgcgcggccatcatc
caagtggtgggtgccggctccggccagagcttcgacatcgaacagtcgcgctaccacaag
atcatcatgatgaccgatgctgatgtggacggtgctcatatccgtatcctgctgctgacg
ctgttctaccggtacatgcggccgcttatcgaacacggctacgtgtatgccgccgtgccg
ccgctgcaccgcatcgcgttgacaggctcgcacaagggcgaatatatctacacgtattcc
gatgacgagctggccggcaaactggccgacctcgacaagaagcgcatcggatacaacgac
gacatccagcgatacaagggtctgggcgagatggacgccgaccagttggcggacaccacc
atggacccgcgcacgcgtatgctgcgccgcatccgcatggaggacgccgcccaggcatcc
gagatcttcagcctgctgatgggcgacgacgtgccgccgcgcaagcagttcatcgtcgac
aacgccgacgatttcgaccgctccaagatcgatacctga
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