Bifidobacterium longum subsp. infantis 157F: BLIF_1362
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Entry
BLIF_1362 CDS
T01420
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Pathway
blf03030
DNA replication
blf03430
Mismatch repair
blf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLIF_1362
03430 Mismatch repair
BLIF_1362
03440 Homologous recombination
BLIF_1362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blf03032
]
BLIF_1362
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_1362
Enzymes [BR:
blf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLIF_1362
DNA replication proteins [BR:
blf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLIF_1362
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLIF_1362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
BAJ71501
LinkDB
All DBs
Position
complement(1588232..1591801)
Genome browser
AA seq
1189 aa
AA seq
DB search
MVERMADYGKNFVQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMY
TNCVANGVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEG
LVNLIKASSVANLEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALR
AAGEFQDIFGKDNFFIELMDHGLPIETQVTGDLLTIAKKLNAPLLATNDSHYVHAEDAQA
QDAMLCINSGSRLDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLAIAERCNVMFD
DHEDGAFMPKFPCPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFC
GYFLVVADYIQWAKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVS
LPDIDVDFDPEGRARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEK
VTKALPPAATGGKDISLHDIFDPTAKRYAEAREFRELYDSDPDAKRITEEAKGIEGLIRQ
TGVHACATIMGSAPITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDT
LKNIEANGKPAIDYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDIS
ALIALYRPGPMSMDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSA
ARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSG
YAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLS
PDVNESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTA
LNRRLVESLIKAGAFDSIDPNRRALFTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAE
AMGDASVTVPDLEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRAK
TMGEGQQVTLAGLVTNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAAAAELAVDA
IVQIRGQVELRDETVSLRATEMQIPTLEAEDERPLVITLPSVALERQRMVQLGQVLANHP
GYCEVHLAVLDEKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggtggaacgcatggctgattacggaaagaacttcgtgcaactgcacaatcacacgcac
tattcgctgctcgatggtgcgtcgaagattcctgatttggctaagcgtgcggccgaactt
ggcatgcctgcggtcggcatcaccgaccatggcaacatgcatggcgcctacgagatgtac
accaactgcgtggccaatggcgtcaagcccatcatcggcatcgaagcttatgtgaccccg
gaaaccgcacgtcaagacaagtcccgcgtgcattggggtaccgaagcccagcgccgcgac
gacgtctccggtggtggtcttatcacccacttgaccatgtgggccgaaaacgacgaaggc
ctggtcaacctcatcaaagcctcgtccgtggccaacctcgaaggtcgcgtcatgcgttat
ccgcgtatggataaggaggtgctcgccacctattccaaaggcgtgatcgcatcctccggc
tgcccctcgggcatcatccagacccgtctgcgcctcggtcaattcgatgaggccctgcgc
gccgccggcgaattccaggacatcttcggcaaagacaacttcttcatcgaactcatggat
cacggtctgcccatcgagactcaggtgaccggtgacctgctgaccatagccaagaaactc
aacgcaccactgctggccactaacgattcccactacgtacacgccgaagatgcccaggca
caggacgccatgctctgcatcaactccggttcccgtcttgacgatccggaccgattcaag
ttcgacggcaccggctactacatcaaaaccgccgaagagatgcgcgaactgttcaaggac
catccggacgcctgcgacaacaccctcgccatcgccgaacgctgcaacgtgatgttcgac
gaccatgaagacggcgcattcatgccgaaattcccctgccccgaaggctgggatgagacc
tccctgttcctcaaaaaagtcgaggaaggtctggagaagcgctacgacggcaacccgccg
ctcgacgtattgaagcaggccgactacgaatgcggtgtgatctgccagatgcagttctgc
ggatacttcctcgtggtcgccgactacattcagtgggccaaggaccacggcattatggtg
ggtccgggccgtggctcggccgcaggcgccatggtcgcctattccatgggcattaccgag
ctcgatccgctcaagcatggcctgattttcgagaggttcctgaaccctgagcgagtgagc
cttcctgatatcgatgtcgacttcgaccctgaaggtcgtgcgcgagtcatcgaatactgc
ggcgaaaaatacggcaccgataaggtcgcccagtgcgtgatctatggcaccatcaaaacc
aagcaggccttgaaggactccgcccgcatcatgggctacgagttctcggtcggtgaaaaa
gtcaccaaggcgctgcctcccgcggccaccggcggcaaagacatcagcctgcatgacatc
ttcgacccgacagccaaacgctacgccgaggccagggaattccgagaactctacgattcc
gacccggacgccaagcgcatcaccgaagaagccaagggtatcgaaggcctgatccgacag
accggtgtacatgcctgcgccaccatcatgggtagcgcgcccatcaccgacacctcgccg
ttgctggaacgcaccgatggcaccatcaccaccaccttcgaataccacacgtgcgaaacg
ttggggctggtcaagatggacttccttggcctgtccaacttgacgatcatccacgacacc
ctgaagaacatcgaggccaacggcaaacccgccatcgactacaccaagattccgctcgat
gacgccgaaacctacaaactcatgtcccgaggagacacgctcggcgtgttccagctcgat
tccgacggcatgcgttcactgctgaaaaccctgaagcccgataacttcaacgatatttcc
gcacttatcgccctgtaccgaccgggcccgatgagtatggattcgcacaccaactacgcc
aagcgcaagaacggcctgcagaagatcacgccaatccaccctgagcttgaggaacctctg
aaacaggtgcttgacgagacctatggtctgatcatctaccaggagcaggtgcagtccgcc
gcccgaatcctcgccggctattcgctgggcaaggcagacgtgctgcgtcgagccatgggt
aagaagaagcccgaagtgctggccaaggagaaggtgccgttcttcgccggtatgaaggag
catggatactccgaagaggcctcccaggccgtgtgggatattctggtgccgttctccggc
tacgctttcaacaaagcgcactccgccgcatacggtctgatctcctactggaccgcatat
ctgaagacgcactacccggtcgaattcatggccgccctgttgcaaggtgccgccaccaac
aaagacaagaccgcactgtacttgggcgaggcccgccgcatgggcatccaggtgctctcg
ccggacgtcaacgaatcggtgtacgagtactcggcagtcggcgacgtcgtccgattcggt
cttggtgccatccgtaacgtgggtgacaaggccgtggccgatatcatcgccgaacgcgaa
ggcccgcgcggcaagttcgtgaacttcatggacttcatccgccgcgtgcccctgaccgcg
ctgaaccggcgattggtcgaatcgttgatcaaggccggtgccttcgactcgattgacccg
aaccgtcgcgcgctgttcaccgtgcacgaggccgccatcgactcggtggtgagtctgaag
cgcaaacaggcggagggccagttcgatttgttctccgatgccgaggatgggggagcggag
gccatgggcgacgcttccgtgaccgtacccgatcttgaggaatgggacaagaagaccaag
cttaacttcgaacgcgaaatgttgggcctgtatgtgtctgaccatccactctccggtatg
cagtcgattctcgcgtccttgcgtgaaatgtccatcgcgcatctggttgatcgagcaaaa
acgatgggcgaaggccagcaggtcacgttggctggtttggtcaccaatgtggaccggcgc
gtatccaagaagggcaacccctgggccatcgtgaccatcgaagacatggaaagctccatc
caatgcatgttcttcggcaaggtctatgaagcggccgccgccgaacttgccgtggacgcc
atcgtacagattcgtggtcaagtggagttgcgcgacgaaaccgtttctctgagagccacg
gaaatgcagattccgaccttggaagccgaggatgaacggccgttggtcatcacgctgccg
tcggtggcgttggagcgccaacgtatggtgcaactcggccaggtgctcgctaatcatcct
ggttactgcgaagtacatcttgcggtgctggatgagaagggtaacgctcaggtgctcacg
tttggcgatcgtttccgcgtcaagcgagatacttcgttgtttgctgagatcaagattctg
tttggccccagctgcttgcctgccgcctga
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