Bifidobacterium longum subsp. infantis 157F: BLIF_1568
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Entry
BLIF_1568 CDS
T01420
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
blf
Bifidobacterium longum subsp. infantis 157F
Pathway
blf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
blf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BLIF_1568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blf03400
]
BLIF_1568
Enzymes [BR:
blf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BLIF_1568
DNA repair and recombination proteins [BR:
blf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BLIF_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BAJ71706
LinkDB
All DBs
Position
1838419..1839789
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AA seq
456 aa
AA seq
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MTTAMGYSSTGRPPTAASLASSGFEPGQGTFAPDRGAINLPNEPRPIDQLPARAAETTAQ
NPWPVSVLSQKFYGAVERWPSAWVTGQITQINTRRAGSAYITLRDDFEDIAMEVNGFGRF
AAAASQFVQGDRVVIHGKPNLWMKRTSLSLRGDTILKVGAGGSLKAMIDELRKQLKGEGL
FDADHKLPLPEFPKTIGLICAPQARAEGDVITNVNLRWPSVTFKVVHVHVQGEQCPAEVV
QAIAQLDADPSVDVIIVARGGGSFEDLIGFSDERVVRAAYACTTPLISSIGHEDDWTLLD
LVADLRASTPTDAAKRVVPDVREQSQLIEGAIDRMRLRVRSRVENEIRLIEGYANRPSLT
QPHTMLEPHQRLIDDSLQRLDIGLRRIVDDAQLTVERAHASLTALSPQSTLNRGYAVVQS
ADGHVLDDASQVSPGDGITVTLKKGVITATTTSATA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgactactgcaatgggctactcatctaccggccgtccaccgaccgccgcttcactggcc
tcgtctggctttgagccgggtcaaggcactttcgcgcccgatcggggcgccatcaatctg
ccgaatgagcctcgccctatcgatcagctgcctgcacgcgccgctgaaaccaccgcgcaa
aatccgtggccggtaagcgtgctgagccagaagttctacggtgccgtggaacgatggccg
tccgcgtgggtcaccggccagatcacgcagatcaatacccgtcgcgccggctcggcctac
atcacgctgcgcgacgacttcgaggatatcgccatggaagtcaatggcttcggcaggttc
gcggccgcggccagccagttcgttcagggcgaccgcgtggtgattcacggcaaaccgaac
ctgtggatgaagcgcacttcgctgtcgttgcgcggggacacgattctcaaggtcggagcc
ggtggcagtctcaaggccatgatcgacgaattgcgcaagcagcttaagggcgagggcctg
ttcgatgccgatcacaaactgcctctcccggagtttccgaagactattggcctgatttgc
gcacctcaggcacgtgcggaaggcgatgtgatcaccaatgtgaaccttcgttggccttcc
gtaaccttcaaggtggtccatgtgcatgttcagggcgagcaatgcccggccgaggtggtt
caggccattgcacaactcgatgccgacccgagcgtggatgtgatcatcgtggcccgtggc
ggcggctcgtttgaggatctcatcggtttctcggatgagcgtgtggttcgtgcggcgtat
gcctgcactacaccattaatctcctccatcgggcatgaggatgactggacattgctggat
ctggtcgccgatctgcgcgcctccacccctaccgatgcggccaagcgcgtggtgccggat
gtgcgtgagcagtcgcagctcatcgaaggtgccatcgaccgtatgcgactgcgggtccgt
tcgcgcgtggagaacgagattcgacttatcgagggatatgcgaaccgcccgagcctgaca
cagccgcacaccatgcttgagcctcatcagcgcttaattgacgactcgttgcaacggctc
gatatcgggctgcgacgcatcgtggacgatgcccagctcaccgtcgagcgagctcacgcc
tcactgaccgcactcagcccgcaatccacgttgaaccgaggctatgcggtggtgcagtcc
gccgatggccacgtactagacgatgcttcgcaggtaagccctggggatggcatcaccgtc
accttgaagaagggtgtcattaccgcaaccaccacatccgcaaccgcgtga
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