Bifidobacterium longum subsp. longum F8: BIL_00140
Help
Entry
BIL_00140 CDS
T02580
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blg
Bifidobacterium longum subsp. longum F8
Pathway
blg03030
DNA replication
blg03430
Mismatch repair
blg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIL_00140
03430 Mismatch repair
BIL_00140
03440 Homologous recombination
BIL_00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blg03032
]
BIL_00140
03400 DNA repair and recombination proteins [BR:
blg03400
]
BIL_00140
Enzymes [BR:
blg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIL_00140
DNA replication proteins [BR:
blg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIL_00140
DNA repair and recombination proteins [BR:
blg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIL_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
tRNA_anti_2
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
CBK69729
LinkDB
All DBs
Position
complement(9109..12678)
Genome browser
AA seq
1189 aa
AA seq
DB search
MVERMADYGNNFVQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMY
TNCVANGVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEG
LVNLIKASSVANLEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFEEALR
AAGEFQDIFGKDNFFIELMDHGLTIETQVTNDLLTIAKKLDAPLLATNDSHYVHAEDAQA
QDAMLCINSGSRLDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFD
DHEDGAFMPKFPCPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFC
GYFLVVADYIQWAKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVS
LPDIDVDFDPEGRARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEK
ITKALPPAATGGKDISLHDIFDPAAKRYAEAREFRELYDSDPDTKRITEEAKGIEGLIRQ
TGVHACATIMGSAPITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDT
LKNIEANGKPAIDYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDIS
ALIALYRPGPMSMDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSA
ARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSG
YAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLS
PDVNESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTA
LNRRLVESLIKAGAFDSIDPNRRALLTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAE
AMGDASVTVPDLEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRAK
TMGEGQQVTLAGLVTNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAAAAELAVDA
IVQIRGQVELRDETVSLRATEMQIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHP
GYCEVHLAVLDEKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atggtggagcgcatggctgattacgggaacaactttgtgcaactgcataaccatacgcac
tattcgctgctcgatggtgcgtcgaagattcctgatttggccaagcgtgcggccgaactt
ggcatgcctgcggtcggtatcaccgaccatggcaacatgcatggcgcctacgagatgtac
accaactgcgtggccaatggcgtcaagcccatcatcggcatcgaagcttacgtgaccccg
gaaaccgcgcgtcaagacaagtcccgtgtgcactggggcaccgaagcccagcgccgcgac
gacgtctccggtggtggtcttatcacccacttgaccatgtgggccgaaaacgacgaaggc
ctggtcaacctcatcaaagcctcgtccgtggccaacctcgaaggtcgcgtcatgcgctac
ccgcgtatggataaggaggtgctcgccacctattccaaaggtgtgatcgcctcctccgga
tgcccttcgggcatcatccagactcgtctgcgcctcggtcaattcgaggaggccctgcgc
gccgccggcgaattccaggacatcttcggcaaagacaacttcttcatcgaactcatggat
cacggtctgacaatcgagacccaggtcaccaacgacctgctgaccattgccaagaagctg
gacgccccgctgctggccaccaacgattcccactacgtacacgccgaagatgcacaggcg
caggacgccatgctctgcatcaactccggttcccgtcttgacgatccggaccgattcaag
ttcgacggcaccggctactacatcaaaaccgccgaagagatgcgcgaactgttcaaggac
cacccggacgcctgcgacaatacgctcgttatcgccgaacgctgcaacgtgatgttcgac
gaccacgaagacggcgcgttcatgccgaaattcccttgccccgaaggctgggatgagacc
tccctgttcctcaaaaaagtcgaggaaggtctggagaagcgttacgacggcaacccgccg
ctcgacgtattgaagcaggccgactacgaatgtggtgtgatctgccagatgcagttctgc
ggatacttcctcgtggtcgccgactacattcagtgggccaaggaccacggcattatggtg
gggccgggccgtggttcggccgcaggcgccatggtcgcctattccatgggcattaccgag
ctcgatccgctcaagcatggcctgattttcgagaggttcctgaaccctgagcgagtgagc
cttcctgatatcgatgtcgacttcgaccctgaaggtcgtgcgcgagtcatcgaatactgc
ggcgaaaaatacggcaccgataaggtcgcccagtgcgtgatctatggcaccatcaaaacc
aagcaggccctgaaagactccgcccgcatcatgggttatgaattctcagtcggtgaaaaa
atcaccaaggcgctgcctccggcggccaccggcggcaaagacatcagtctgcatgacatc
ttcgaccctgccgccaaacgttatgccgaggccagggaattccgagaactctacgattcc
gacccggacaccaagcgcatcaccgaagaagccaagggtatcgaaggcctgatccgacag
accggtgtacatgcctgcgccaccatcatgggtagcgcacccatcaccgacacctcgccg
ttgctggaacgtaccgatggcaccatcaccaccaccttcgaataccacacgtgcgaaacg
ttggggctggtcaagatggacttccttggcctgtccaacttgacgatcatccacgacacc
ctgaagaacatcgaggccaacggcaaacccgccatcgactacaccaagattccgctcgat
gacgccgaaacctacaaactcatgtcccgaggagacacgctcggcgtgttccagctcgat
tccgacggcatgcgttcactgctgaaaaccctgaagcccgataacttcaacgatatttcc
gcacttatcgccctgtaccgaccgggcccgatgagtatggattcgcacaccaactatgcc
aagcgcaaaaacggcctgcagaagatcacgccaattcaccctgagcttgaggagcctctg
aagcaggtgcttgacgagacctatggtctgatcatctaccaggagcaggtgcagtccgcc
gcccgaatcctcgccggttattcactgggcaaggcagacgtgctgcgtcgagccatgggt
aagaagaagcccgaagtgctggccaaggagaaggtgccgttcttcgccggtatgaaggag
cacggatattccgaagaggcatcccaggccgtgtgggatattctggtgccgttctccggc
tacgctttcaacaaagcgcactccgccgcatacggtctgatctcctactggaccgcatat
ctgaagacgcactacccggtcgagttcatggccgccttgttgcaaggtgccgccaccaac
aaagacaagaccgcactgtacttgggcgaggcccgccgcatgggcatccaggtgctctcg
ccggacgtcaacgaatcggtgtacgagtactcggcagtcggcgacgtcgtccgattcggt
cttggtgccatccgtaacgtgggtgacaaggccgtggccgatatcatcgccgaacgcgaa
ggcccgcgcggcaagttcgtgaacttcatggacttcatccgccgcgtgcccctgaccgcg
ctgaaccggcgattggtcgaatcgttgatcaaggccggtgccttcgactcgattgacccg
aaccgtcgcgcgctgctcaccgtgcacgaggccgccatcgattcggtggtgagtctgaag
cgcaaacaggcggagggccagttcgatttgttctccgatgccgaggatgggggagcggag
gccatgggcgacgcttccgtgaccgtacccgatcttgaggaatgggacaagaagaccaaa
cttaacttcgaacgcgaaatgttgggcctgtatgtgtctgaccatccgctctccggtatg
cagtcgattctcgcgtccttgcgtgaaatgtccatcgcgcatctggttgatcgagccaaa
acgatgggtgaaggacagcaggtcacgttggctggtttggtcaccaatgtggaccggcgc
gtatccaagaagggcaacccctgggccatcgtgaccatcgaagacatggaaagctccatc
caatgcatgttcttcggcaaggtctatgaagcggccgccgccgaacttgccgtggacgcc
atcgtacagattcgtggccaagtggagttgcgcgacgaaaccgtttctctgagagccacg
gaaatgcagattccgaccttggaagccgaggatgaacgtccgttggtcatcacgctgccg
ccggtggcgttggagcgccaacgcatgatgcaactcggtcaggtgctcgctaatcatcct
ggttactgcgaagtacatcttgcggtgctggatgagaagggtaacgctcaggtgctcacg
tttggcgatcgtttccgcgtcaagcgagatacttcgttgtttgctgagatcaagattctg
tttggccccagctgcttgcctgccgcctga
DBGET
integrated database retrieval system
