Bifidobacterium longum subsp. longum F8: BIL_00250
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Entry
BIL_00250 CDS
T02580
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
blg
Bifidobacterium longum subsp. longum F8
Brite
KEGG Orthology (KO) [BR:
blg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blg03400
]
BIL_00250
Enzymes [BR:
blg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIL_00250
DNA repair and recombination proteins [BR:
blg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BIL_00250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CBK69739
LinkDB
All DBs
Position
complement(19881..23996)
Genome browser
AA seq
1371 aa
AA seq
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MVEHVDALPRSEDADNLSDDFPTNTMPYVISASAGTGKTTQLLQDILLDLLNRNADEAHS
SIRESLIITFTVAAAAEIRRRLEQNLQYAILYARRNHGCQPGSLVLLDTDYQLGGDDSEL
ARTILHDCHHAQTVFSVALNDLPTVQISTIDALSKRIVDRNADTLPVAPGFQILADDAMK
NRLRGQTLDALFESWYDERNSMHARFMDVLDNMQGPRHDGDLRATMMSLYDKALTKPNRI
GWLSRLAEPYRFNIASLNQVVGGEYGNEYLDRYFRGWIDMAEHPLAELRSCLDEALASCH
DAHTAQQDTVVKSLRMICDLPQYLRSESWNAVRARVIDANPLDVLPKRITVGKTAILKST
AIAVPKDSELGRRLAETVRGIKGIVSDLQSKLAFTAEQVDSLDEVAARRLEGLIALITTF
DQQYALVKQQESVAEFSDVAFWALDAMQQPDVAKRIGAQWRYIYVDECQDNNALQNRFIR
EISRNAAKLTMVGDVKQSIYGFRDASPEEFGDICNSVTDASHRRELWVNYRSVPEIITFV
NTVFARLMTPNMGATDYLKEQLQIGSAKQAGKPFDAEAIELLVSNAAPDLSADVVADENG
TDTAPTVRAGKDELQVDMIVRRVQELCEGPRAQYSYGDIAVLARGATHFADLADRLYRVG
IPVEVQGVGDLYRQPEIQIALDWLRIIANRHQDVPLVAVLRTMGFTDDDLARIRLHNRGW
LFDVMRRIAESGGEADESAVLSSDVLLAKISAFLRIYDAACDYARVHSLSDSLWHLYAVS
GLFDFAGNMPEGERRQANLRLLVEKADAFAVAQERGLQPFLDAVTMWSASGSGEEASTVP
TKNAVHIMTIHKSKGLQWPVVILMGASNNLLTGSRTAVVRTIAHQTRNEDGAVAEYGEGA
LSLVDQRNHVRVDTFQRAVIDSRAKELEAAEELRLLYVAMTRAERKLIIAGSYRPGKNDD
GNLNLRTMAQGISLSGDGRTIDPRTVVKNSGSPNYLYWILGSLLASGDADDDSSAILRPN
EVRAWNLAAGLQETAPAMAATGRAITIRFCSAAPEPTTTMNERTDGYGYINKRIDVTGLR
LPDEPPRMPVVVSSSKARSWMIDDAESISDDTDSLAVLPSDDAAAPIAMLEDNLDDWKQR
REAHSGFFIPDFMKKVSDVEPSASEVGTAVHNVLELFDWGTEPFREQCEAELRNIVDRLE
ANHVITPQVAHIVLTRELEGLLWFVTGENCPLSAQIRAHRDTLFREEPFSMLIERNRLNA
KVNGSGMAGGVPNTKNDSGNVAEQCDDTIVVRGIIDGYFLDPTAKTITLFDYKTDKMRPG
ETVKDWSQRLRTEYAQQQALYAEALEHRYSGYAVVRRWLVGLIGHRIIHIS
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacatgttgatgcattacctaggtcggaagatgcggataatctctcggacgat
tttccgacaaacaccatgccttacgtcatcagcgcatccgcaggcaccggcaaaaccact
caactcttgcaggatattctgctggacttgctgaaccgtaatgcagacgaagcgcattca
tccatccgcgaatcgttaattattactttcaccgttgccgcagccgcagaaattcgccgg
cgcttggaacagaacctgcagtacgccattctgtatgcgcggcgcaatcatggatgccag
ccgggttcactcgtgctcttggatacggactatcaattaggtggagacgacagcgaactg
gcgcgtacgattctgcacgattgccaccatgcgcaaaccgtattctccgttgccttgaac
gatctgccaaccgtgcaaatcagcactattgatgcgctctccaaaagaatcgtggatcgc
aatgccgatacattgccggtggctccaggattccagattcttgctgatgatgccatgaag
aaccggctgagaggccaaacactcgacgcgttattcgaatcgtggtatgacgagcgcaac
tcaatgcacgcgcggttcatggatgtgttggacaacatgcaagggccccggcatgatggt
gacttgcgcgccaccatgatgagcctgtatgacaaggcactcaccaagcccaaccgcatc
ggttggcttagccggctcgccgaaccataccggttcaacattgcgtcgctgaatcaggtc
gttggtggtgaatacggcaatgaatatttggaccgttattttcgaggctggattgatatg
gcagaacatcctcttgccgaattgcgatcgtgtcttgatgaggcgctcgccagctgccac
gatgcgcacaccgcgcagcaagatacggtagtcaaatcattgcggatgatatgcgatttg
cctcagtacttgcgtagcgaatcatggaatgcagttcgtgctcgtgttatcgatgccaat
ccattggacgtactgcccaagcgcattactgtcggcaaaactgccattcttaagagtacg
gcaatcgccgtacccaaagacagtgaactgggccgtcgcttggcggaaacggtgcggggc
attaaagggatcgtttctgatttgcaatcgaaactggcctttaccgctgaacaagtggac
tcgcttgatgaggtcgctgcgcgaagactcgaaggattgattgcgctcatcaccacgttc
gaccagcagtatgcgcttgtgaaacagcaggagtccgtagcggagttcagtgatgtggct
ttctgggcattggatgccatgcagcagcctgacgtggccaagcgtatcggtgctcagtgg
cgatatatttatgtggatgaatgccaggataataacgccctgcagaatcgattcattcgc
gaaatcagccgaaatgcagccaaacttaccatggtcggtgatgtgaagcaaagcatttat
gggttccgtgatgcctcgccggaggagttcggcgatatctgcaatagtgttacggatgcg
agccatcgccgggaattgtgggtgaactatcgatcggtgccggaaatcatcacttttgtg
aatacggtatttgcccgactgatgacgccgaatatgggtgcgaccgattacctgaaggaa
cagttgcaaatcggctcggcaaagcaagccggtaaaccattcgatgcagaagccattgaa
ttgttggtgagtaacgcggcacctgacttgagtgctgatgttgtggctgatgaaaacggc
actgacactgcaccgacagttcgcgccggcaaggacgaattacaggtggacatgatagtg
cgccgtgtccaggagctctgcgaggggcctcgcgcgcagtattcatatggggatatcgcg
gtgctggctcgtggcgctactcattttgccgacctggctgaccgactatatcgtgtcggc
attccagtcgaagtacagggcgttggagacctgtatcgtcagccggagatacagatcgcc
ttggattggttgcgtattatcgccaatcgtcatcaggatgtgccgttggttgcggtgcta
cggactatggggttcacggatgatgatttggcgcggattcgtctgcataacagaggctgg
ctatttgacgttatgcggcggattgctgagagtgggggagaagctgatgaatcggctgtt
ctttcttctgatgtgttgcttgcaaagatatcggcattcctgcgaatctatgatgccgca
tgcgattatgcgcgagttcactctctgtctgattcgttgtggcatctctatgccgtttct
ggcttgttcgatttcgcaggcaatatgcctgaaggtgagcgacggcaggcgaacctgcgc
ttgcttgtagaaaaggctgatgcatttgctgtagctcaggagcgtggattgcaaccattc
cttgatgccgtaacaatgtggtccgcgagtggctccggtgaagaagcttcaacagtgcct
accaaaaacgccgtgcatatcatgacgattcataaatccaagggattgcaatggcccgtc
gtgatactcatgggtgccagcaataatctgctgaccggatcgagaaccgctgtcgttcgc
acgattgctcatcagacaaggaatgaggatggggctgttgccgaatatggcgaaggtgcc
ttatcgttggttgaccaacgtaaccatgttcgagtggatactttccagcgcgcagtgatt
gattcgcgggccaaggagttggaggcggcagaggaacttcgtttgctctatgtggcgatg
actcgtgccgaacgcaagttgattatcgcgggatcgtaccgtccaggaaagaacgatgat
ggcaatctgaatttgcgtacgatggctcaaggcatctcgctaagcggcgatggacgcacc
atagatccacgaacggtggtcaagaatagtggtagccccaattatctctattggattcta
ggatcattgctggcgtctggagatgcggatgatgattcgtctgcgattcttcgccctaat
gaggtccgtgcgtggaatcttgctgcgggactacaggaaacagcgccggctatggcggcg
acgggcagggccattacgattcgattctgcagtgctgcgcctgagccgacgaccactatg
aatgagcgaacggacgggtatggctatatcaataaacgtattgatgtgactggtttgcga
ttgcctgatgagcctccgcgcatgccagtggtagtgagttcctccaaggctcgcagctgg
atgattgatgatgcggaatctatatctgatgacactgattcgctggctgtattgccgtct
gatgacgcggctgcgccaattgccatgctggaagacaatctagatgattggaagcaaagg
cgggaagcgcatagtgggttctttattcctgactttatgaagaaggtatccgacgttgag
ccatctgcttcggaggtgggtactgcggtccacaatgtactggaactctttgattggggt
actgagccgttccgtgagcagtgcgaagccgagctgagaaacattgttgaccgtctggaa
gcgaatcatgtcatcacgccgcaagtggctcatattgtgctgactcgcgagctggaaggc
ttgctctggtttgtcactggagaaaattgcccgctatcggcgcaaatacgagctcatcgg
gatactctgttccgggaagagccattctcgatgttgattgaacgtaaccggcttaatgcc
aaggtgaacggtagcggcatggctggtggcgtgcccaacacgaagaatgacagcggcaac
gttgctgagcaatgtgacgacacaatcgtggtccgaggtatcatagacggctatttcctt
gatccaaccgccaagaccatcaccctcttcgactacaaaaccgacaaaatgcgcccgggt
gaaacagtcaaagactggtctcagcgtctccgcaccgaatacgctcaacaacaagctctc
tacgccgaggccctagaacatcgctattctggatatgctgtagtacggcgatggcttgta
gggctcattggacacaggattattcacatttcgtga
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