KEGG   Bifidobacterium longum subsp. longum F8: BIL_01970
Entry
BIL_01970         CDS       T02580                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
blg  Bifidobacterium longum subsp. longum F8
Brite
KEGG Orthology (KO) [BR:blg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:blg02048]
    BIL_01970
Enzymes [BR:blg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BIL_01970
Prokaryotic defense system [BR:blg02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BIL_01970
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD HSDR_N_2 7TMR-HDED
Other DBs
NCBI-ProteinID: CBK69880
LinkDB
Position
complement(220872..223991)
AA seq 1039 aa
MAVSKVESRTVSECSLNNITSMDPLNEEWYENLIVEHLTEKLGYEHLYGPDVRRTDDSYR
DVFLPDILPDALRRINRNLPEAAVEEAIRKIQNVEIGSLEQRNEIFNDYLQSGVEVHFFD
GKEERDDIVRLLDFDDPENNDFHVVNQWTFVEYSEKRPDVIIFVNGMPLVLFELKSPSRE
ETDASHAYLQLRQYMKQIPSMFVPNVFCVMSDMTQTRVGTITSDEDRYVAWKSADGDYSG
TKAAAWSTMIDGMLPKERLLDIIQNFVCFNDSSEKVVKIIAAYHQYFAVRKAIVRAEEAV
NGDGRIGVFWHTQGSGKSLSMVFFAHLLQRYLESPTIVVITDRNDLDDQLFGQFSRCARF
LRQKAVQAESRRNLQELLEGREANGIIFTTMQKFSDGDEPLCDRSNVVVMVDEAHRGQYG
LTERINADGHVSVGAARVVRKALPNASYIGFTGTPISTDDRNTREIFGDYIDVYDMTQSV
EDESTKPVYYESRVVSLHLDENALGRIDAVYKEFADQADEASVEKSKHDLGGLDAIFDTP
ETIDALCRDIVDHYENNRADVLAGKALIVAYSRPIAMKIYYRIMELRPEWKDKVGVVMTM
SNQDPEEWFDVCGGTTHKKEMERRFKDDSDSLKIAIVVDMWLTGFDVPSLSTMYVFKPMK
GHNLMQAIARVNRVCKGKEGGLVVDYIGIAGALKRAMKDYTSRDQHNYGDMNIAETAYPK
FLEKLDVCRDLMYGFNYRKLIFQNSREALADAIAEGTDWLLDLERHEDTESFLKQCQLMN
QALSLCKSMVSEEDAHEAAYLSVLRVQVLRLTGRGSGGGSGMTYTEFNKQVSEILQQSVH
ADGVLNLFEKDSVEISLFDEAFLQEVAGMKEKNIAIESLKRLIKEKVRAYGRTSVVKSQK
FSEMLQNTLNAYLNGMLTNAQVIEELVNMAKEIMKDRDDAQKLGLSDEEMAFYDAITQPQ
AVKDFYDNDQLVSIARELTDAMRSNATIDWQKKESARAGMRRAIKRLLRKYKYPPEGVED
AMKTVMEQCELWADTKISE
NT seq 3120 nt   +upstreamnt  +downstreamnt
atggctgtttccaaagtcgaatctcgtacggtctcggagtgttctctgaacaacatcacg
tccatggatccactgaacgaggaatggtacgaaaatctgatcgtcgaacatctaacggag
aaactcggatatgagcacctgtacgggcccgatgttcgccgcaccgacgactcgtatcgc
gacgtattccttcctgatattctcccggatgcgttgcgacgaatcaacagaaatctgccg
gaagcagccgtcgaggaggccatccggaagattcagaatgtcgagatcggcagcttggag
cagcgcaacgagatattcaatgactacctgcaatcaggagtcgaagtgcacttctttgac
ggcaaggaagagcgtgatgacatcgtccggctgcttgatttcgacgatcccgagaacaac
gatttccatgtcgtgaaccagtggacgttcgtggagtattccgagaaacgtcccgatgtc
atcattttcgtgaacggcatgccgttggtgttgttcgagctgaagtccccgtcgagagag
gagacggacgcttcacacgcgtacctgcaattgcgccagtacatgaagcagataccgagc
atgttcgtgcccaacgtgttctgcgtgatgagcgatatgacccagaccagggtcggcacg
atcacatccgacgaggaccgttacgtggcttggaagtcggcggacggcgactattccgga
acgaaagccgcggcatggagcaccatgattgacggcatgctcccgaaggaacggctgctc
gacatcatccaaaacttcgtatgcttcaacgattcctccgagaaggtcgtgaagatcatc
gccgcataccaccagtatttcgcggtgcggaaagccatcgtcagagcggaagaggccgtc
aatggggatggcaggatcggcgtgttctggcacacccagggaagcggaaaatcgctttcg
atggtgttcttcgcacatctgctgcagcgttatcttgaaagcccgaccatcgtggtcatc
accgaccgcaacgatctcgacgaccagcttttcggacaattcagccgctgcgccaggttc
ctgcgccagaaggcggtccaggccgagagccgcaggaatcttcaggaactgcttgagggt
cgtgaggcgaacggcatcatcttcacgaccatgcagaagttctcggacggcgacgagccg
ttgtgcgaccggagcaacgttgtggtgatggtggacgaggctcaccgcggccagtacggc
ctgaccgaacggatcaacgcggacggtcatgtgtcggtcggcgcggcccgtgtcgtgcgc
aaggcactgccgaacgcgtcctatatcggtttcaccggaacgccgatctccacggatgac
cgcaacacccgcgagatcttcggcgactacattgacgtgtacgacatgacccagtccgtc
gaggacgagtccaccaagccggtctactacgaaagccgtgtggtctcgctccatcttgac
gagaacgcgctgggccgcatcgacgcggtctacaaggagttcgcggaccaggccgacgag
gcgagcgtggagaagtccaagcatgacctcggcggcctcgatgccatcttcgacactcct
gaaaccatcgacgcattgtgccgcgacatcgtggaccattacgagaacaaccgcgccgac
gtcctggctggcaaggccctgatcgtggcgtacagccggccgattgcgatgaagatctac
tacaggatcatggagctgcgccccgaatggaaagacaaggtcggcgtggtgatgaccatg
tcgaaccaggatccggaggaatggttcgacgtgtgcggcggcaccacgcacaagaaggag
atggaacgcaggttcaaggacgattccgattccctcaagatcgccatcgtcgtggacatg
tggctcaccggcttcgacgtgcccagcctgtccaccatgtacgtgttcaagccgatgaag
ggccataacctcatgcaggccatcgcccgcgtcaaccgcgtgtgcaagggcaaggagggc
ggtctggtcgtggattacatcggcatcgcaggcgcgctcaagcgggcgatgaaggactat
accagccgtgaccagcacaattacggcgacatgaacatcgccgagaccgcctatccgaaa
ttcctcgaaaagctcgacgtgtgccgtgatctcatgtacggcttcaactaccgcaaactc
atcttccagaacagcagggaggcgcttgccgacgccatcgcggagggaaccgactggctg
ctcgatctggaacggcacgaagacacggaatcgttcctcaagcaatgccagctcatgaac
caggcgctgagcctgtgcaaaagcatggtaagcgaagaggacgcgcatgaggcggcttac
ctatccgtattgcgcgtgcaggtccttcgcctgaccggacgtggctccggcgggggcagc
ggcatgacgtacacggagttcaacaagcaggtgagcgagatcctccagcagagcgtgcat
gcggacggcgtgctcaacctgttcgagaaggacagcgtggagatctccctgttcgatgag
gcgttcctccaggaggtcgccggcatgaaggagaagaacatcgcgatcgagagcctgaaa
cgcctcatcaaggagaaagtgcgggcgtacgggcgcaccagcgtggtcaaatcccagaag
ttcagcgagatgctccagaacacgttgaacgcgtatctcaacggcatgctcacgaacgcg
caggtcatcgaagagctcgtcaacatggccaaggagatcatgaaggaccgcgacgacgcg
cagaagctcggcttgagcgacgaggagatggcgttctacgacgcgatcacccagccgcag
gcggtcaaggacttctacgacaacgaccagctcgtctcgatagcccgcgagttgaccgat
gcgatgcggagcaacgccacgatcgactggcagaagaaggaaagcgccagggccggcatg
cggcgtgccatcaaacgtttgctgcgcaaatacaagtatccgcccgaaggcgtcgaggac
gccatgaagaccgtcatggaacagtgcgagctgtgggccgacaccaagatcagcgaatag

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