Bifidobacterium longum subsp. longum F8: BIL_15970
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Entry
BIL_15970 CDS
T02580
Name
(GenBank) RecG-like helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
blg
Bifidobacterium longum subsp. longum F8
Pathway
blg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BIL_15970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blg03400
]
BIL_15970
Enzymes [BR:
blg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BIL_15970
DNA repair and recombination proteins [BR:
blg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BIL_15970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecG_dom3_C
AAA_30
AAA_16
Flavi_DEAD
AAA_22
SLFN-g3_helicase
Cas3-like_C_2
IstB_IS21
nSTAND3
DEXQc_Suv3
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
CBK71043
LinkDB
All DBs
Position
complement(1876584..1879217)
Genome browser
AA seq
877 aa
AA seq
DB search
MSITMDTTLASLVTNKRRVSALKSLGIVTVGDALTYYPFRVTEPVPLRAIREAAPGQQMA
FAAVIRDMRVVPMNARRGYRLEATVDDADFARSRRAPGSTARLTFFSYRKSYVDWVSMRL
RAGTSVVVSGMPSEYMGQLQFTHPEILTVAPGSAGTGAGLEGYARGAASGNGAFAGSTDP
YASVQSAYPPAAAASSGAALKYDADTVQEALTRVCRPRPVYHASSRISSEHIHETILGLL
WMMGARTSSTPDGQLAGAGSAGIVAPTTDTIAVQNGEENSGTTAESGAEALSQSIPDVLP
ESVRKAKNLMHRAEAFLAIHDPASTTRFKEAIETLRYEEAFVSQTSLLKARSHAHKSAAH
SCPLVTDSLRDQFIASLPFSLTAGQQQVIHDIAADLAHDWPMQRLLQGEVGSGKTVVALA
AMLQAVDAGYQAVLVAPTQVLAEQHAETIGRMVEQLKPAIPVTLLTGGMKLAARRKALAA
ASSGEPGIIVATHAAFSKTFQAPHLALVVIDEQHRFGVEQRESLNAKTDDGTTPHLLVMT
ATPIPRTAAMTWFGDLDISWLTELPGGRKPIRTVVVNEADAATMGRMFAHIRARVDAGER
AYIVCPRIDADDEENEGGSGVSAAAGSARGRAAASGSSARTAAGGRATRAAADAIGIDDP
YETFDENGETVARPPLHAVAEIADRLQKLPQFQGIRFATLTGRDKDDVKTQVMADFAGGE
TPILVSTTVIEVGVDVKQASCIVIFDADRYGLSQLHQLRGRVGRGGTNSWAFLISRAEPG
SPAEQRLEVIHHSLDGAEIAQADLEFRGAGDVLGDAQSGGKSSLKLLRVVKDADMIADAR
TRAGQLLAADPELAGEVQLAGAVLDFTRGNETFLTSS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcactatggacaccactctcgcttcgctggtcaccaacaagcgtcgcgtgtcc
gcgctcaaatcgctgggaatcgtcactgtcggcgacgccctgacctactatcccttccgc
gtcaccgaaccggtgccgcttcgcgccatccgcgaggccgcacccggccagcagatggca
tttgccgccgtgatacgagacatgcgcgtggtgccgatgaacgctcgccgcggctaccga
ctcgaggcgacggttgacgacgccgactttgcccgttcgcgtcgcgcacccggcagcacg
gcccggctcacgttcttttcgtatcgtaaatcgtatgtggattgggtcagcatgcggctg
cgcgccggcacgtctgtggtggtctccggtatgcccagcgaatacatggggcagctgcaa
ttcacgcaccccgaaatcctcactgtcgcgcccgggtcggccggaacaggagcggggctt
gagggttacgctcggggtgcggcatccggcaatggcgcgtttgcgggaagtaccgatccg
tatgccagtgtgcagtccgcgtatccgccggccgcggctgcctcttccggggccgcgctg
aaatacgacgccgataccgtgcaagaggcgcttacccgcgtctgccggccccgcccggta
tatcacgccagttcgcgtatctcgtccgaacatattcatgagacgattctgggattgctg
tggatgatgggggcccgcacgtcatccacgcctgacgggcaactcgctggcgctgggtca
gccggcattgtggctcccacgaccgacaccatcgccgtccaaaacggggaagagaattcc
ggcacgaccgccgaatccggtgctgaggcgctctcccaatccatcccagatgtgctgccc
gaatcggtgcgcaaggccaagaacctcatgcatcgggctgaggcgttcctggccattcat
gatccggcctccacgacccggttcaaggaggccatcgaaaccctgcgctatgaggaggct
ttcgtttcgcagacctcgctgcttaaagccaggtcgcacgcccataaatccgcggctcac
tcttgcccgttggtaaccgacagtctgcgcgatcagttcatcgcatccctgccgttctcc
ctcactgcagggcagcagcaggttattcatgatattgccgccgatttggctcatgactgg
ccaatgcagcgtctgctgcaaggcgaggtgggctccggcaaaaccgtagtggcgctcgct
gccatgctccaagccgtagacgccggctatcaggccgtgcttgttgccccgactcaggtg
ctggccgagcagcatgccgaaaccattggccggatggtggagcaactcaagccagcgatt
ccagtcacgttgttgacgggcggcatgaagcttgctgcgcgacgtaaagcacttgctgcg
gcgtccagtggtgagccgggcattatcgtggccacgcacgcggcgttttccaagaccttc
caagccccgcacttggccttggtggtgatcgacgagcaacaccggttcggtgtggaacag
cgcgaaagcctcaacgccaaaaccgatgacggcaccacgccgcatctactggtgatgacc
gccacgcccatcccgcgcaccgccgccatgacttggtttggcgatctcgatatttcctgg
ctcaccgaattgcctggcggccgcaaaccgattcgtaccgtggtggtcaatgaggccgac
gccgccaccatggggcgtatgttcgcgcacattcgcgcgcgagtcgacgcgggggagcgg
gcctatatcgtgtgcccgcgcattgatgcggatgatgaggagaacgaaggcggttccggc
gtttcggcagcagccggttctgcccgcggacgcgccgcagcatctggttccagtgcccgc
acagctgcaggcggccgtgcgacgcgcgcggcggccgatgccatcggcatcgacgacccc
tacgaaaccttcgacgaaaatggcgaaaccgtggctcgcccgccattgcatgcggtggcc
gaaatcgccgaccggttgcagaaacttccacagttccaaggcattcggtttgcgactctg
accggccgcgacaaggatgacgtcaaaacccaggtcatggccgattttgccggcggcgag
actccgatcctggtgtccaccacggtgatcgaagtcggcgtggacgtcaagcaggccagc
tgcatcgtcatctttgatgccgaccgatacggcctctctcagctgcatcagctgcgcggc
cgcgtggggcgtggcggcaccaactcgtgggcgttccttatttcccgtgcggaacccggc
tccccggccgagcaacggctcgaagtgattcaccactcgctcgacggtgccgaaatcgcc
caagccgacttggaattccgcggtgccggcgatgtgctcggcgacgcccaatccggcggc
aagtccagcctgaagctcctgcgcgtggtcaaggacgccgacatgatcgccgacgcccgc
acccgtgccgggcagcttctggccgccgaccccgaactggcaggtgaggtccaactcgcc
ggtgccgtcctcgacttcacccgaggcaacgaaaccttcctgacctccagctga
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