Bifidobacterium longum subsp. longum F8: BIL_16880
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Entry
BIL_16880 CDS
T02580
Name
(GenBank) Oligoribonuclease (3'->5' exoribonuclease)
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
blg
Bifidobacterium longum subsp. longum F8
Pathway
blg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
blg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BIL_16880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blg03019
]
BIL_16880
03009 Ribosome biogenesis [BR:
blg03009
]
BIL_16880
Messenger RNA biogenesis [BR:
blg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BIL_16880
Ribosome biogenesis [BR:
blg03009
]
Eukaryotic type
Pre-60S particles
RNases
BIL_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
CBK71124
LinkDB
All DBs
Position
complement(1950108..1950752)
Genome browser
AA seq
214 aa
AA seq
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MNTQHDITVSGKPLNPPKPPAKPHMLLWIDTETTGLDPNQCELLEVGMQVTDLKAETRGD
SLHLIVHPDNVRNWANHPEMLKAYEMHLANGLMLACAEAPKTGYDYKHTALNIHEFLNDQ
LSQYTLHPAGTNVDFDLRQLDVHLSRHLEHPITQGLHHRKLDLTSFRLADQAIGGNPYQN
HAGTHRVQDCIRRDINDYTAYLDIIRTGTQGDRQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccaacacgacatcaccgtcagcggcaaacccctcaacccgccaaaaccgcca
gccaaaccccacatgctcctatggatcgacaccgaaaccaccggcctcgaccccaatcag
tgcgaactcctggaagtcggcatgcaggtcaccgacctgaaagccgaaacccgaggcgac
agcctgcacctgatcgtccaccccgacaacgtgcgcaactgggccaaccaccccgaaatg
ctcaaagcctacgaaatgcacctcgccaacgggctcatgctcgcctgcgccgaagcaccc
aagaccggctacgactacaagcacaccgcgctcaacatccacgaattcctcaacgaccaa
ctcagccaatacacactccaccccgcaggaaccaacgtggacttcgacctgcgccagctc
gacgtgcacctcagccgccacctcgaacaccccatcacccaaggactccaccaccgaaaa
ctcgacctcaccagcttccgcctcgccgaccaagccatcggcggcaacccctaccaaaac
cacgcaggcacccaccgagtccaggactgcatccgtcgggacatcaacgactacaccgcc
tacctcgacatcatccgaaccggcacccaaggagacaggcaatga
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