Bacillus paralicheniformis: BaLi_c12830
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Entry
BaLi_c12830 CDS
T02694
Symbol
addB
Name
(GenBank) ATP-dependent deoxyribonuclease AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
blh
Bacillus paralicheniformis
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c12830 (addB)
Enzymes [BR:
blh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BaLi_c12830 (addB)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BaLi_c12830 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_16
Dpoe2NT
Motif
Other DBs
NCBI-ProteinID:
AGN35652
LinkDB
All DBs
Position
1261288..1264788
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AA seq
1166 aa
AA seq
DB search
MGAVFLSGRSGSGKTTFILNEIREKLRDEPLGKPIIFLVPDQMTFLMEYELSKTPDLGGT
IRAQVYSFSRLAWRVLQHTGGMNRPFLTGTGIQMLLRRLIEEHKGEFKVYQNASDKSGFT
EQVERMLTEFKRHCLQPESIRDMIEGTGKSEYEDERILSDKLHDLYILYSKLEENLENQY
VQSEDYLTLLAEQIPYADEIRNAAVYVDGFHQFTPQEMNVLEQLMVHAEEITFSLTADQP
FTANSPNELHLFRMTGKAYYDLYQKAKELGLDPSEVRLEETKRHQQHSELRHLERYFDER
PAKPYRGRTESLRIMQASNRRTEIEGIAREIHSLIRQGRFRLRDIAVIARNVEDYKDTIK
EVFKDCELPFFIDGKESMQNHPLIELIRSTLDIIKGNWRYEAVFRCVKTELLFPEGQPKE
RLREQIDQLENYCIAYGIKGDRWTSKDPFVYRRYASLDEDFAKTDKEIETENMLNELKGW
IVPPIHRLQKRLKKAETVREMAEAVYLYLEEADVPMKLEQERRLAEESGRIAESRQHEQV
WDAVIQLLDEFVEMMGTERISFALFQQMIETGLESLKFALIPPALDQVFIGNMDLSRMYG
TKCTFLIGVNDGILPARPADDGVLSDDDREWLKRNGAQLAATGREQLLDENFLIYMTLSS
PSEKLYVSYPIADSEGKTLLPSTVVKRLNELFPDGEEKMLIHEPEQLDDEAQLEFLVNKG
AALSHLAGQLGIWTRQYAISDVWWSTYNFLMNEPDRIFSQNILSSLFFRNKVENLNRHVS
RDLYGEHIQGSVSRMETFKACPFSHFASHGLKLKERQFFKLEAPDIGQLFHSALKLISDR
LHELKLDWRDLTKAQCETLSSDAVERLAPKLQKEILLSSNRHHYVKQKLQKIIARVSGIL
SEHAKASGFAPVGIELGFGGKGPLPPMRFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDKGLDLAEVYYGLALQMLTYLDLSITHSTDWLGMEASPAGVLYFHVHDPMIQASV
PLGLDEIEKEIFKKFKMKGLLLGDQEAVKLMDTTLEQGRSNMISAGLKKDGSLRSDSDVI
AEEDFHVLRRHIRRTFQKAGEEITDGKVSIEPYKLKDRTPCTYCSYRSFCQFDESLEENE
YRILKPEKDNVILERLKKEDETDGDF
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgggagcagtatttttatcaggcagatccgggagtgggaaaacgacctttatcctgaat
gaaatcagagaaaaacttcgcgatgaaccgctcggaaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatacgagcttagcaaaacacccgatttgggcggaact
atccgcgcccaagtgtacagtttttcaaggcttgcctggcgagtgctccagcataccgga
ggcatgaatcggccgtttttgacggggacgggcattcagatgctgctgcggagactgatt
gaagagcataagggcgagtttaaagtctatcaaaacgcaagcgataaaagcggatttacg
gagcaggtggaacggatgctgaccgaatttaaacggcattgtctgcagcctgaaagcatc
cgggacatgatagaggggacgggcaaatcggaatacgaagatgaacggatcctttccgat
aaattgcacgacttatatattttgtacagcaagcttgaggaaaatctggagaatcaatat
gttcaatctgaggattatttgacgcttttggccgagcagattccgtatgcggatgagatt
agaaacgctgccgtttacgtggacggatttcaccaatttacgccacaggagatgaacgtg
ctggaacagctgatggtacatgcggaggagatcactttttcgctgacggcggatcagccg
tttacggccaacagcccgaatgagctccatctgttcagaatgaccgggaaggcgtactat
gacctttaccagaaggcgaaggaacttggccttgatccgtcagaagtgcggctggaagaa
acgaaacggcaccagcaacattcggagctccggcaccttgaacgctattttgacgagcgt
cctgcaaaaccgtatcgcggacggacggaatcgctccgcatcatgcaggcgtcgaacaga
agaaccgagattgaaggaattgcgcgcgagattcattctttaattcgccagggccgcttc
aggcttagggatatcgccgttattgcccgcaatgttgaagattataaagatacgataaaa
gaagtttttaaagactgtgaacttccttttttcatagacggcaaggaatcgatgcaaaat
catccgctcattgagctgatccgttcgacgcttgatatcattaaaggaaactggcggtat
gaagcggtgttccgctgtgtcaaaacggaacttttattcccggaaggacagccgaaggaa
cggctgcgcgaacagattgaccagcttgaaaactactgtattgcgtatggcattaaagga
gacagatggacaagcaaagatccgtttgtttacagaaggtacgcttcactggatgaggat
tttgccaagacagacaaagagattgaaacggaaaatatgctcaatgaactaaagggctgg
atcgttccaccgatccacaggctgcagaagcgcttgaaaaaagctgaaaccgtcagggaa
atggccgaagccgtttacctttatcttgaagaagccgatgttccgatgaagcttgaacag
gaaaggcggctggccgaagaaagcggtaggattgcagagtcgcgccagcatgagcaagta
tgggatgccgttattcaactgttggacgagtttgttgaaatgatgggcacagagcggata
tcgtttgctttatttcagcaaatgattgaaaccggcttggagtctttgaaattcgcgcta
attccgcccgctcttgatcaagtgtttatcggcaatatggacctttcaaggatgtacggc
acgaaatgcacatttctcatcggtgtaaacgacggtatacttccggcgaggcctgcggac
gacggcgtgctttcagacgatgaccgggagtggctgaaacgaaacggcgcacagctggct
gcgacgggtcgagagcagctcttggatgagaattttctgatctatatgacgctttccagc
ccgtctgaaaagctctatgtctcctatccgatcgcagattcggaagggaagacgctgctt
ccttcaacagtagtgaaacggctgaatgagctgttcccggacggcgaagagaagatgctg
attcatgaacccgagcagctggacgacgaagcccagcttgaatttctcgtgaataaaggc
gccgccttgagccatttggcagggcagctcggcatttggacgaggcagtatgcgatcagc
gatgtatggtggagtacatacaactttttaatgaatgagcctgaccgcatcttttctcaa
aatatcctgtccagcctgtttttcagaaacaaggtcgaaaacttgaaccggcatgtgagc
cgcgatttatatggggagcacattcagggaagcgtgtcgcggatggagacgttcaaagcc
tgtccgttttcccattttgcttcgcacggtttaaagctgaaggaacgtcaatttttcaag
cttgaagctccggatatcggtcagctgttccactcggcgctgaagctgatttcagatcgg
cttcacgagcttaaactggattggcgcgacttaacgaaagcccaatgcgagactttgtca
agcgatgcagttgaacggctcgcgccaaagctgcaaaaagagattttgctcagttcgaac
cgtcatcattacgtgaagcagaagctgcaaaaaatcattgccagggtatcgggcatttta
agcgagcatgcaaaagcaagcgggtttgcccccgtcggcatcgagctcggattcgggggg
aaaggtccgcttcctccaatgcgttttaccttgaagaacggctgcacaatggagcttgtc
ggccggatcgacagagtggataaagcggagagctcaaaagggctgctgcttaggattgtc
gactataaatcaagcgataaaggcctcgatttggccgaggtgtattacggcctcgccctg
caaatgctgacatatctcgatttgtcgatcacacattcaaccgattggctcggcatggag
gcatcccctgcaggcgtgctttattttcatgtgcacgatccgatgatccaggcttcagtg
ccgctcggccttgatgaaatagaaaaagagattttcaaaaagttcaagatgaaagggctg
ctcttgggagaccaggaagcggtcaagctgatggataccacgctggaacaaggcaggtcg
aacatgatcagcgcaggcttaaaaaaagacggctcgctccgttcggactctgacgttatt
gcagaagaggattttcatgtattaaggcgccatatccgccggacatttcagaaggccggc
gaggagatcacagacggtaaagtgtcgatcgagccttacaagctaaaagaccggacaccg
tgcacatattgttcgtaccggtcattctgccagtttgacgaatcgcttgaggaaaacgaa
taccggatattaaaacccgaaaaagacaacgtgattttggagcggctgaaaaaggaggat
gagacagatggagatttctaa
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