Bacillus paralicheniformis: BaLi_c12860
Help
Entry
BaLi_c12860 CDS
T02694
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
blh
Bacillus paralicheniformis
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c12860 (sbcC)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BaLi_c12860 (sbcC)
Archaeal homologous recombinant proteins
BaLi_c12860 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_29
Syntaxin
AAA_21
Seryl_tRNA_N
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AGN35655
LinkDB
All DBs
Position
1269705..1273097
Genome browser
AA seq
1130 aa
AA seq
DB search
MKPISLSIKGLHSFRQEQVIDFERLCDAGVFGIFGPTGSGKSSILDAMTLALYGKVERAA
NNTHGILNHAEDELAVSFTFKLQTGHETAYKVERVFKRTDAVKVKTSICRFIEMKEEQIV
LADKANEVNRKIEELLGLTIDDFTRAVVLPQGKFAEFLSLKGAERRQMLQRLFNLEQYGD
RLVKKLKKQAQTAQARKNEMLAEQAGLGDAGEEALKQAEQHLEEAESLLQSKKRERDAEA
QRFAEYQEIWNLQQEKESYLKKEAELLKKQEQIQEKESRLHLAETANTLKPYADALLAAR
EDAERAHREEKQAREQLEQYEELHKKTEREYEDFRRLKNEKEPELLKQEEQLTALKEIEN
KRLAAQAEAEKKQREQRLKEEEIKHAADELAKVKSLLERGTAKQNQLKAELKSVQVSSEE
RKNCRNANQLAFHIQQLNNDAALEKERLGQQETLIKELQQEQQAVDQKVKAETERIEALF
AAVERAYALVCETDRSLSETIRVASQKKEEIAAKREQANRDQLAIELAKQLKDGEPCPVC
GSVHHEMPARVGIESLSFKEADSELEKTEAIIAEAGALAQEFLSAKVALEQQSDHLVSEC
PFLVKSKHELPETAASIEEGTIPERYNRISFEWKGIRQDLAETKSRMSKLLHTYKELCKK
RDQISERLSHEEKERNRLQNRVRELNDQLNERRKSFGEQFDGLSYEQAEKWQKTIEEKDL
AAEEFEKRIETSVGFLTKHEQQKEKLTERLFALDKEKLDLRYAVESLNKEINDYQKELMG
YPDTAAIDKKLQDVKTQLAKLHEQEQTLYGRLKETESEVSRLRGQTKGCELALREAEARL
AKAADIWQEKSGGTPFEKASEVKASILDRDDLARLKEDIQMHWDQTKQCESNIKRITEKL
DGRSVSEESWEKAAVTKDKAEEAFSKALEERGAAGKALAVIRENHKRFKELEASLAEWQT
YIDRLDKLQAVFKGNSFVEYLAEEQLESVTRDASARLGELTRQRYAIEVDSEGGFVMRDD
ANGGVKRPVTSLSGGETFLTSLALALALSAQIQLRGEYPLQFFFLDEGFGTLDQDLLDTV
VTALEKLQSDNLSVGVISHVQELRARLPKKLIVHPAEPSGKGTAVSLEMI
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatttctctgtctattaaggggctgcacagtttcaggcaggagcaggtgatc
gattttgagcgcctgtgcgatgccggtgtattcggtatcttcgggccgaccggaagcggc
aagtcgtcgattcttgacgcgatgactctcgctttgtacgggaaggtggagcgggccgcc
aataatacgcacggtattttgaatcatgccgaagatgagcttgccgtatcgtttacgttt
aagctgcagacaggccatgagacggcttataaagtggaacgggtctttaagcggacagat
gccgtcaaggtcaaaacatcgatctgccgcttcattgaaatgaaagaggaacaaatcgtt
ctggccgataaagcgaatgaagtaaaccggaaaatcgaagagctgctgggcttgacgatc
gacgattttacaagggcagtcgtcctgccgcaaggtaaattcgccgaatttctttcctta
aaaggagcggagcggcggcagatgcttcagcgcctgttcaacctcgaacaatacggggac
aggctcgtcaaaaaactgaagaaacaggcgcaaacagcgcaggccagaaaaaatgagatg
cttgccgagcaggctggattgggcgatgcgggggaagaggcgctgaaacaggcggaacag
catctcgaagaagctgaaagccttttgcaaagcaagaagcgcgaacgagacgcagaagcg
cagcgctttgcggagtatcaggagatttggaacctgcagcaggaaaaagaaagctatctg
aaaaaagaggcggagcttttaaagaaacaggaacagattcaggaaaaagaaagccgcctg
cacctcgccgaaacggcaaatacgctcaagccttatgcagacgccttgctggcagcgcgg
gaagatgccgaacgcgcacaccgggaagaaaaacaagcgcgggaacaattagaacaatat
gaagagcttcataaaaaaacagaacgcgagtacgaggatttcaggcgtcttaaaaatgaa
aaggaaccggagcttctcaagcaagaagaacagctcaccgctttgaaggaaattgaaaac
aagcggctagccgcacaggccgaggccgagaagaagcagcgcgaacagcgtttgaaagaa
gaggaaatcaagcatgcggcagacgagctggccaaggtgaaaagtctgcttgaacgcggg
acagccaagcagaatcagctgaaagcggagctgaaatctgtccaggtatctagcgaagag
cgtaaaaactgccgaaatgccaatcagcttgcttttcacattcaacagcttaacaacgat
gccgctttagaaaaggaacggcttggtcagcaggagacgctgattaaagagctccagcaa
gaacagcaagcggtggatcaaaaggtaaaagctgaaaccgaacgcattgaggcattgttt
gccgctgtcgaacgagcgtacgcgctcgtttgcgaaacagacagatcgctctctgagacc
atccgtgtggcatctcaaaaaaaagaagagattgcggcaaaacgggaacaggcaaaccgt
gatcagctggcaatcgaactggcaaagcagctcaaagacggagagccttgtccggtctgc
ggatctgtacatcatgaaatgcccgcccgcgtcggaatagaaagcctgtcctttaaagag
gcggattccgaactggagaaaacggaagccatcatcgctgaagccggtgcgctggctcag
gagtttctctcggccaaagtggcactcgaacagcaatccgaccacctggtgagcgaatgc
ccgtttttagtcaagagcaaacatgaactgcctgaaaccgctgcatcgatagaagaaggc
accattcccgaacggtacaaccgcatcagctttgaatggaaaggaatcagacaggatctc
gcagagacaaaaagcaggatgtccaagctccttcacacatataaagagctctgcaagaaa
cgcgaccaaatcagcgagcgactcagccatgaagaaaaggagcgtaacaggcttcaaaac
cgcgtccgcgaattaaatgaccagttaaatgaacgccgaaaaagcttcggcgaacaattc
gacggcctctcttatgaacaggctgaaaaatggcaaaaaacgattgaagaaaaagatctg
gccgcagaggaattcgaaaagcgtatcgaaacgagcgtcggctttctcacaaaacatgaa
cagcaaaaagagaagctcaccgagcgcttgtttgcgcttgataaagaaaagctcgacctc
cgctatgctgtcgaaagccttaataaagaaataaacgattatcaaaaagagctgatgggc
tatcccgatacagctgcaatcgacaaaaagcttcaagacgtgaaaacgcaattggccaag
ctgcatgagcaggaacagacgctttacggacggctcaaagagaccgaatccgaagtcagc
cgtttaagaggacagacaaaagggtgtgagctcgctttgcgtgaagcggaagcaaggctt
gcgaaagcggcggacatctggcaggaaaaatccggaggtacaccgtttgaaaaggcctct
gaagtgaaagcgagcattttagaccgcgatgatcttgcccggctgaaagaagacattcaa
atgcattgggatcagacaaaacagtgcgagtccaatatcaagcggattacggaaaagctt
gatgggagatcggtttctgaggagagttgggaaaaagccgccgtcacgaaggacaaagct
gaggaggcattcagcaaagccttggaagaaaggggcgcggccggcaaagctctcgccgtc
atccgcgagaaccataaaaggtttaaggaacttgaagcatcattggctgaatggcagaca
tacatcgaccgtcttgataaactccaagccgtctttaaaggaaacagctttgttgaatac
ttggcagaagagcagcttgaaagcgtcacaagagacgcatctgcaagactcggcgaactg
acaagacagaggtatgcgattgaagtcgactcagaaggcggttttgtgatgagggacgat
gccaacggcggagtcaagcgccctgttacgagtctgtcaggtggggagacgtttctgact
tcactggcgcttgcgcttgcactttcggcacagatccagcttcgcggagagtatccgctc
caattcttctttttggacgaagggtttggcacgcttgatcaggatttgctggatacggtc
gtgaccgcattggagaagcttcagtctgacaatctgtcggtcggtgtgatcagccacgtt
caggaacttcgggccaggctgccgaagaagctgattgtccatccggctgaaccgagcggc
aaaggcacagctgtatcgcttgaaatgatttaa
DBGET
integrated database retrieval system
