KEGG   Bacillus paralicheniformis: BaLi_c17030
Entry
BaLi_c17030       CDS       T02694                                 
Symbol
rnjA
Name
(GenBank) ribonuclease J1
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
blh  Bacillus paralicheniformis
Pathway
blh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:blh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BaLi_c17030 (rnjA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:blh03019]
    BaLi_c17030 (rnjA)
Messenger RNA biogenesis [BR:blh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BaLi_c17030 (rnjA)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 RMMBL DUF4453
Other DBs
NCBI-ProteinID: AGN36071
LinkDB
Position
complement(1662193..1663860)
AA seq 555 aa
MKFVKNDQTAVFALGGLGEIGKNTYGVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYL
VKNEEKIKGLFITHGHEDHIGGIPYLLKQVNIPVYGGQLAIGLLRKKLEEHGLLRQTKLH
IIEEDDIVKFRKTSVSFFRTTHSIPDSYGIVVKTPQGNIVHTGDFKFDFTPVGEPANLTK
MAEIGKEGVLCLLSDSTNSEIPDFTMSERKVGESIDDIFRKVEGRIIFATFASNIHRLQQ
VIEAAVANGRKVAVFGRSMESAIEIGQTLGYIKCPKNTFVEANEINRLPAGKVTILCTGS
QGEPMAALSRIANGTHRQISIIPGDTVVFSSSPIPGNTISVSRTINQLYRAGADVIHGAV
TNIHTSGHGGQEEQKLMLRLIKPKFFMPIHGEYRMQKMHVKLATDCGIPEENCFIMDNGE
VLALTSEEASVAGKIPSGNVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMKEFKV
SAGPDLISRGFVYMRESGDLINDAQDLIAGHLKKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtaaaaaatgatcaaacggctgtatttgcccttggaggacttggggaaatc
ggcaaaaacacgtacggggtccagtttcaggacgagatcgtgctcatcgatgcggggatt
aagtttccggaagacgagctcctcggaatcgactatgtcatccccgactacacttattta
gtcaaaaacgaagaaaaaatcaaaggtctttttattacgcacggccacgaagaccatatc
ggcggaattccgtacctgctcaaacaggtgaacattcccgtttacggcggacagctcgcc
atcggccttctcagaaagaagcttgaagagcacggtctgctgcgtcaaacaaagcttcat
atcattgaagaagacgatatcgtcaaattcagaaaaacgtcggtttcttttttcaggacg
acccacagcattccggactcatacgggattgtcgtaaaaacaccgcaaggaaacatcgta
cataccggtgactttaaattcgattttacaccggtaggcgaacctgccaacttgaccaag
atggccgaaatcggaaaagaaggcgtgctttgcctgctttctgacagcaccaacagtgaa
atccctgatttcacgatgtcagagcgcaaagtcggagaaagcattgatgatattttccga
aaagttgaagggcggatcatcttcgcaaccttcgcgtcaaacatccaccgcctgcagcag
gtgatcgaagcagctgttgcaaacggacggaaggttgccgtatttggacgaagcatggag
tcggcgattgaaatcggccaaacgctcgggtatattaagtgtccgaaaaatacgtttgtt
gaagcgaatgaaatcaacaggcttcctgccggcaaagtgacgattctttgtaccggaagc
caaggtgaaccgatggctgcgctatcccgaattgctaacggcacacaccggcaaatttcc
atcattcccggggatacggtcgtattttcatcatctccgatcccgggcaatacaatcagc
gttagtcgcacaattaaccagctttaccgggcgggcgccgatgtcatccacggagctgtg
actaacattcatacatcaggacatggcggacaggaagagcaaaagctgatgctccgcctc
atcaagccaaagtttttcatgccgattcacggtgaatacagaatgcagaaaatgcacgtc
aaacttgcgacagactgcggaattcctgaggaaaactgctttattatggacaacggcgaa
gtgcttgctttgacaagcgaagaagcctcagtcgcaggtaaaatcccgtcaggcaatgtc
tatattgacggaagcggcatcggcgacatcgggaacatcgtgcttcgcgaccgccggatt
ctttctgaagaagggcttgtcattgtcgttgtcagcatcaacatgaaagagttcaaagtg
tccgcaggacctgacttaatttccagaggatttgtctacatgagagaatccggtgattta
atcaacgatgcccaggacctgattgcaggacaccttaaaaaagtgatggaacgcaaaacg
acgcagtggtctgaaattaagaacgagatcacagacacgctcgctccgttcctctacgaa
aaaacaaaacgccgcccgatgatccttccgattattatggaagtctaa

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