Bacillus paralicheniformis: BaLi_c18650
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Entry
BaLi_c18650 CDS
T02694
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
blh
Bacillus paralicheniformis
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blh03032
]
BaLi_c18650 (topA)
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c18650 (topA)
Enzymes [BR:
blh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BaLi_c18650 (topA)
DNA replication proteins [BR:
blh03032
]
Prokaryotic type
DNA Topoisomerases
BaLi_c18650 (topA)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BaLi_c18650 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
AGN36233
LinkDB
All DBs
Position
1823885..1825960
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKD
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFKPEEYWTIEGSFLKGKETFEASFFGINGEKHQLKSEEDVKQILSQIKGNKFEVKK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAQEEAASFIGEQYGKEFLGSKRKPAKKNENAQDAHEAIRPTSVLRKPSDLK
AVLGRDQLRLYKLIWERFVASQMAPATLDTMSVDLENNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKNKMLPDLAEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGQIVLDLIMEFFPEIINVEFTAKMEKELDDVEDGN
IQWVQIIDSFYKDFEKRVEKAEAEMQEVEIEPEYAGVDCEECGHPMVYKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPSCKTGNIVERKSKKRRIFYGCDRYPECEFVSWDKPLERKC
PKCEDMLVEKKLKKGVQVQCVNCDYKEEQQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatacttagtcatcgtggaatcgcctgcaaaggcaaaaacgattgagcgatac
ttaggaaaaaaatataaagtgaaagcttcgatgggacacgtcagagacttgccgaaaagc
cagatgggcgttgacatcgagcagaactttgaaccaaaatacatcacgatccgcgggaaa
ggccccgtgttaaaagaattaaaaacggccgccaaaaaggcaaaaaaagtctatctcgca
gccgaccccgacagggaaggggaagcgatcgcgtggcatttggcacacagccttgatctg
gatctgaattccgactgccgcgtcgtatttaatgagattacaaaagatgcgatcaaagat
tcatttaagcatccgcgcatgatcaatatggatcttgtcgacgcccagcaggcgagaaga
attctggaccgccttgtagggtacaaaatcagcccgattttatggaaaaaagtaaaaaaa
ggcttgagtgcgggacgtgtccaatctgttgcactccgccttatcattgacagagaaaaa
gaaatcaacgattttaaacctgaagaatattggaccattgaagggtcttttctcaaaggc
aaagaaacatttgaagcgagtttcttcggaataaacggcgaaaagcaccagctgaaaagc
gaagaagatgtaaaacaaatcctctcccagatcaaagggaacaaatttgaggttaaaaag
gttacgaaaaaagaacggaagcggaaccctgcgctcccgtttacaacatcgacgcttcag
caggaagcggcgcgtaaattaaatttccgggcaaagaaaacgatgatgatcgcccagcag
ctttatgaaggaatcgatctcggcaaagaaggaactgtcgggttaatcacttatatgaga
acggattcaacacgcatctcgaatacagctcaagaagaagcggcatcattcatcggcgaa
cagtacggaaaagaatttttggggagcaagcgaaaacctgccaaaaagaatgaaaacgcc
caggatgcccacgaagcgatcaggccgacctcggtgctcagaaagccttccgatctgaag
gcggtattgggaagagaccagcttcgactatacaagctgatctgggagcgctttgtcgca
agccagatggctccggcgacactcgatacgatgagcgtcgatcttgaaaacaacgggttg
acatttcgggcgaacggcagtaaagtcaagttttcaggtttcatgaaggtgtacgttgaa
ggaaaagacgatcagatggaagagaagaataagatgcttccggatctcgctgaaggcgac
accgttctttcaaaagatatcgaacccgaacagcacttcacacagccacctccgcgctat
acggaagcaaggctggtcaaaacgcttgaagagctgggaatcggccgtccgtcgacttac
gcgccgacgcttgacacaattcaaaagcgcgggtatgtcgcccttgataacaaacgcttt
atcccgactgaactcggtcaaatcgtgcttgacttgatcatggagtttttccctgagatc
attaatgttgagttcaccgccaaaatggaaaaagagcttgatgacgttgaagacggaaac
attcaatgggtgcagatcatcgattccttttacaaggactttgaaaaacgcgttgaaaag
gcggaagccgagatgcaggaagtggaaatcgaaccggagtatgcgggtgtggactgtgaa
gagtgcggccacccgatggtctataaaatgggccgctacggcaaatttatggcctgctcc
aattttccggactgccgcaacaccaagccgattgtaaaagagatcggggtcaaatgccct
tcatgcaaaaccggcaacatcgtcgagcgcaaatcgaaaaaacgccgtattttttacggc
tgtgaccgctatcctgaatgcgaattcgtatcatgggataaaccgcttgaacggaaatgt
ccgaaatgtgaggacatgcttgtcgagaaaaagctcaaaaaaggcgttcaagtgcagtgc
gtgaattgcgattataaggaagaacaacaaaagtag
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