Bacillus paralicheniformis: BaLi_c19250
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Entry
BaLi_c19250 CDS
T02694
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blh
Bacillus paralicheniformis
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blh03016
]
BaLi_c19250 (truB)
Enzymes [BR:
blh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BaLi_c19250 (truB)
Transfer RNA biogenesis [BR:
blh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BaLi_c19250 (truB)
Prokaryotic type
BaLi_c19250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AGN36293
LinkDB
All DBs
Position
1884723..1885652
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AA seq
309 aa
AA seq
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MYNGVLLLHKPVGMTSHDCVMKIRKLLKTKKVGHTGTLDPEVSGVLPICIGRATKVVEYL
TEKSKTYDAEVTLGCSTETEDQTGQVTEKKPVLAPPDEQAVQSVLRSLEGTIEQVPPMYS
AVKVGGKKLYEYARAGIEVERPKRAITIHHIELTSEIRHEQDKARFRFVVTCSKGTYVRT
LAVTIGEKLGYPAHMSNLVRTASGPFTLDECLTFEDVEGLIAGGTLSEKLVPIERALDHL
PKWIISDTLAKKVENGAVLETPGSFSHLTSEDRIAVFTEAGRCTAVYYPHPTKTGLLKPA
KVLVQKSEQ
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtataacggagtccttctgttacataaaccggtcggcatgacttcgcacgactgcgtc
atgaagatccgcaaactgttgaaaacaaaaaaggtcggccataccggcacattggatccc
gaggtgtcgggcgttctcccgatctgcatcgggagagcaaccaaagtcgtcgagtatttg
acggaaaagtccaaaacatatgatgcagaggtcacgcttggctgttccacggagacagaa
gaccagacggggcaagtcacggaaaagaagcccgttttagcgccgcctgatgaacaggcc
gtgcagagcgtcctgagatctcttgaaggaacgattgagcaagtcccgccgatgtattcc
gctgtcaaggtaggcggcaaaaagctgtatgaatacgcgcgggccggtatcgaggttgaa
cggccgaagcgggccatcaccatccatcatatcgaactgacatccgagattcgccatgag
caggataaagcccgctttcggtttgttgtgacatgttcaaaaggcacatatgtcaggacc
ttggcggtaacaatcggggagaagctcggatatcccgcgcatatgtccaacctggtcagg
accgcatcaggcccttttacccttgatgaatgcttgacctttgaagacgtcgaaggcttg
attgctggtggaacattgtccgaaaagctcgtccccatcgaacgtgcgcttgatcatttg
ccgaaatggataattagtgatacattagctaagaaagtggaaaatggagcggtgcttgaa
acgcccggcagcttttctcatttgacgagcgaagaccgcattgcggtctttacggaagca
ggccggtgcacagccgtctattatccgcatccgaccaaaaccggcctgttgaagccggca
aaagtactcgtgcaaaaaagcgaacaatag
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