KEGG   Bacillus paralicheniformis: BaLi_c19370
Entry
BaLi_c19370       CDS       T02694                                 
Symbol
rnjB
Name
(GenBank) ribonuclease J2
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
blh  Bacillus paralicheniformis
Pathway
blh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:blh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BaLi_c19370 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:blh03019]
    BaLi_c19370 (rnjB)
Messenger RNA biogenesis [BR:blh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BaLi_c19370 (rnjB)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AGN36305
LinkDB
Position
1897273..1898937
AA seq 554 aa
MKKNTENIRIIALGGVGEIGKNLYVIEIDSDIFVVDAGLMHPENEMLGIDVVIPDISYLI
ERSDRVKAIFLTHGHEENIGGVFYCLNKLSVPVYGTKLTLALLKETLKQYGVNKKPDLRE
IHSKSVITFESTKVSFFKTNHSIPDSVGVSFKTSLGSIVCTGDFKFDQTPVLNQTSDIGE
IAKIGNSGVLCLLSDSANAEKPGYTPSEAVVGGEISDVMYNAENRVIIAVFASNFNRIQQ
VIDAALQNGRKLAVSGKNISTILQLAMKLGYVTADEDLFIPVQEVKKYPKREVAILTGDN
HGEPLAALTRIAKQGHKQLDIEKGDTVLIASSPIPGQELVYSKAVDLLTRAGAQVVFAQK
RVHVSGHGCQEELKLMLNLLKPKYLIPVNGEYRMQKAHSKLAEEIGMKRSDIFLIEKGDV
VEFRGQNVKIGDKVHSGNILIDGLGVGDIGNIVLRDRRLLSQDGILIVVITLDKKKKHLV
SGPEIITRGFVYVRESEQLIVEATELVRELVNESTENAVVEWSALKQAMRDALNQFLYEK
TKRKPMIIPIIMEV
NT seq 1665 nt   +upstreamnt  +downstreamnt
ttgaaaaaaaatacagaaaatattagaattatcgccttaggaggcgtcggagagatcgga
aaaaacctttatgtcattgaaattgattctgacatattcgtggttgacgccggtctcatg
catccagaaaatgaaatgctgggtatcgatgtggtcattcctgacatttcatatttaatt
gaacgatctgaccgcgtaaaggcgatttttctcacacacgggcatgaggaaaacataggc
ggcgtattttactgcctgaacaaactttctgtgcctgtttacggaacgaagctgacgctc
gcccttttaaaggaaacgctgaagcagtacggtgtaaacaaaaagcccgatttaagagaa
attcattcaaaatctgttattacatttgaatcgacaaaggtgtcattctttaaaacaaat
cacagcattccggattccgtcggtgtcagctttaaaacatccctcgggtccatcgtgtgc
actggcgattttaaatttgaccagacacctgttttaaaccagacaagcgacatcggcgaa
attgccaaaatcggcaacagcggtgtgctgtgcctgctttccgacagtgccaatgctgag
aaaccgggctatacgccttcagaagcagtcgtcggcggagagatatccgatgtaatgtac
aatgccgaaaaccgcgtcattattgccgtgttcgcgtctaactttaaccggattcagcag
gtcattgatgccgcgctccaaaacggcaggaagcttgcggtttcaggaaaaaatatttcg
acgatactccagctggcgatgaagctcgggtatgtcacggcagatgaagatctgttcatc
cctgtccaggaagttaaaaagtatccgaaaagagaagtcgcgattttgacaggggacaac
catggagagccgctcgccgcattgaccaggatcgcaaaacaagggcataagcagctcgac
attgagaaaggggataccgtcctgatcgcatcctcccctattccgggtcaggagcttgtc
tactccaaagcggtcgacctcttaacaagagcgggcgcgcaggtcgttttcgcccaaaaa
cgcgtccatgtatcaggccatggctgtcaggaagaactgaagctgatgctcaacctgctg
aagccgaagtatttaatccccgtaaacggtgaatacagaatgcaaaaagcgcattccaag
cttgccgaagaaatcggtatgaaacggagcgacattttcctgattgaaaaaggagacgtc
gtggaattccgcggacaaaacgtgaaaatcggcgataaagtgcattcaggcaatattttg
atcgatggactcggtgtcggcgacatcggcaatatcgtgctcagagaccgccgtcttctg
tcccaggacggaatcttaatcgttgtgattacccttgataaaaagaaaaaacatcttgta
tcaggacccgaaattatcacgagaggttttgtctatgtcagagaatctgaacagctgatc
gttgaagcgacggaacttgtcagggaactcgtcaacgaaagcacagaaaacgccgtcgtc
gaatggtccgccttaaaacaggcgatgcgtgacgcattaaaccagttcctatacgaaaaa
acgaaacgaaaaccaatgatcattccaatcatcatggaagtataa

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