Bacillus paralicheniformis: BaLi_c31530
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Entry
BaLi_c31530 CDS
T02694
Symbol
dnaE
Name
(GenBank) DNA polymerase 3 alpha subunit DnaE
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blh
Bacillus paralicheniformis
Pathway
blh03030
DNA replication
blh03430
Mismatch repair
blh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BaLi_c31530 (dnaE)
03430 Mismatch repair
BaLi_c31530 (dnaE)
03440 Homologous recombination
BaLi_c31530 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blh03032
]
BaLi_c31530 (dnaE)
03400 DNA repair and recombination proteins [BR:
blh03400
]
BaLi_c31530 (dnaE)
Enzymes [BR:
blh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BaLi_c31530 (dnaE)
DNA replication proteins [BR:
blh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BaLi_c31530 (dnaE)
DNA repair and recombination proteins [BR:
blh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BaLi_c31530 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
AGN37497
LinkDB
All DBs
Position
complement(3146656..3150000)
Genome browser
AA seq
1114 aa
AA seq
DB search
MPFVHLQVHSGYSLLNSAASVEDLTAKAKELGYSAMALTDDEVMYGAVEFYKSCKKRGIK
PIIGLTASVLTDEKEQLSYPLVLLAKTNKGYQNLLKISSVLQSKSKTGIKEKWLKSYHEG
LIALTTGGTSHVEALLKEGLIEEAKNAALRCLSIFGEGSFYLSYQPYKGDPLLSERILEL
SEHTGIPIAATGDVRYIEKEDAAAYTCLKAIKAGEKLNEDMKAEGDLHLELKPPAEMLDI
YRDRPDALENTVKIADLCQVDLSLGQTRLPKYPAPFGKNADDYLAELCFLGLEKRFDAAP
REYVERLEYELKVIRDMAFSDYFLIVWDFMKFAHDNGIITGPGRGSAAGSLVAYTLFITD
VDPIKHKLLFERFLNPERISMPDIDIDFPDTRRDEVIQYVKNKYGALHVAQIITFGTLAA
KAALRDVGRVMGISPKEADQLAKLIPSKPGVTLKEARALSVELDKRLNGSKKLQDIFKTA
QKIEGLPRHTSIHAAGVVLSEEPLTNIIPIQEGHDGVYLTQYSMGYLEDLGLLKMDFLGL
RNLTLIESIKTLIEKSERVTIDFSAIPYEDEQTFKLLSEGDTTGIFQLESAGMRNVLKRL
KPSSLEDIVAVNALYRPGPMENIPLYIERKHGRVAVSYPHEDLAEILKDTYGVIVYQEQI
MMIASRMAGFRLGEADLLRRAVGKKNKEILDTERNHFISGCLKKGYSVQAANEVYDLIVK
FANYGFNRSHAVAYSMIGYQLAYLKAHYPLYFMCGLLTSAIGNEEKLAQYIYEAKGKGLH
VLGPSINKSGYPFVVENGALRYSLRAVKGVGISAVKEIYRARKEKPFADLFDFCVRTSVK
SVNRKTIEALIFAGAMDEFGENRATLLASVDVALEHAELFAGDNDQLGFFLDEGLTIKPK
YAETEEMPLVDLLAHEKETLGIYFSDHPLSVHRKKLDRAGALPIIQLLASSRKKAALGGL
LTKMKTIRTKTGQTMAFLELSDESGEIEAVVFPEQFRQLSPILEEGVSLFAEGRLETRNE
KRQLIIAGASLVESLHAKKQPSVYIKVEESQHTHDIFKKISSILLEHKGETPVCVYYEKR
KQTMQLPESYNIKADHAALYRLKSVVGEKNVVLR
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgttcacctgcaagtacacagcggttacagcttattaaacagcgccgcttcc
gtagaggacctcacggccaaagccaaagagctgggctacagcgcaatggcgctgacggat
gatgaggtcatgtacggggcggtggaattttataaatcatgcaaaaaacgcggcatcaag
ccgattatcgggcttacagcctcagttttaacagatgaaaaagaacagctttcatatccg
ctcgttcttttggcgaaaacaaacaaaggctaccaaaacctgctgaaaatcagcagcgtg
ttgcagtcgaaatcaaaaaccggcatcaaagaaaaatggctcaaaagttatcatgaaggg
ctcattgcgctgacaacgggcgggacaagccatgttgaagcgctgttgaaagaagggctg
attgaagaggcgaagaacgccgccctccgctgtctttcgatcttcggagagggcagcttt
tatttgtcgtatcagccgtacaagggcgacccgcttctttctgaacgcattctggagctc
agcgaacatacgggaattccgattgctgcaaccggcgatgtacgctacatcgaaaaagag
gatgcggcagcttatacgtgtttaaaagcgattaaagcgggcgagaagctgaacgaagac
atgaaggccgaaggagatctgcatcttgagctcaagccgcccgctgaaatgcttgacatt
tacagggatcgtccggacgcgttggagaatacagtcaaaatcgcggatctgtgccaggtg
gacctgagccttggccagacgcgcctgccgaaatatccggcgcctttcggcaagaatgct
gacgattatttggctgagctttgctttctcggactggaaaaacggttcgatgccgctccg
agggagtatgtcgaacggcttgagtatgagctgaaagtgattcgcgacatggcgttcagc
gactattttttgatcgtctgggatttcatgaagtttgcccacgacaacggcattatcaca
gggccggggcgggggtcggcggccggctctctcgtcgcttatacgctgtttatcacagat
gtcgatccgatcaagcacaaattgctgtttgaacggtttttaaatccggagcgcatcagc
atgcccgatatcgatatcgattttcccgatacgagaagggatgaagtcatccaatacgtg
aaaaataaatacggggcactgcacgtagcgcaaattatcacgtttggtacattggccgca
aaagcggcgctccgggacgtcggcagggtgatgggcatcagtccgaaagaagccgaccag
ctggcgaaattgattccgtccaaacctggagtgacgctgaaagaggcgagagctctttct
gttgaactggacaagcgcctgaacgggtccaagaagcttcaggacatatttaaaacggct
cagaaaatcgaagggcttccgcggcatacgtcaattcatgcggcgggcgtcgtgttgagc
gaggagccgctgacgaatatcataccgatacaggaaggacatgacggtgtatatttaacg
caatattcgatgggctatctcgaagacttgggactattgaaaatggattttctcggcttg
cgcaatttaacgctcattgaatcgatcaaaacgctgatcgaaaaaagcgagcgggtcacc
atcgatttttcggcgattccctatgaagatgaacagacgtttaagctgctgtcagaagga
gatacgacaggtattttccagctcgaatcagccggcatgagaaacgttttaaaaaggctc
aagccatcaagccttgaagacattgtcgctgtcaatgccttgtaccgcccgggcccgatg
gaaaatatcccgctgtatatcgaacgaaagcacggacgggttgccgtgtcttatccgcac
gaggatttggccgagattttgaaagatacatacggcgtgatcgtttatcaggaacagatc
atgatgatcgcatcgcggatggcgggtttcaggcttggagaagccgatcttttgcgaagg
gcggtcggcaaaaaaaacaaggaaattctcgatacagagagaaatcattttattagtgga
tgcttgaaaaaagggtattccgtacaagcggctaatgaagtatacgatctgattgtaaaa
ttcgccaattacggttttaaccggagtcatgcggttgcatacagcatgatcggctaccag
ctcgcttatttaaaagcgcattaccccctctactttatgtgcggcctcttgacgagtgcg
atcggaaatgaggaaaagcttgctcagtacatctatgaagcgaaagggaaagggctgcat
gttttaggtccttccattaataagagcggctatccgttcgtcgtggaaaacggggcgctg
cgctacagtttaagggctgttaaaggcgtcgggatttcggctgtgaaagaaatctacagg
gcaagaaaagaaaagccgttcgcagatttgtttgacttttgtgtcaggacttctgtgaaa
agcgtgaaccggaaaacgattgaagctttaatttttgccggagcaatggatgaattcggt
gaaaaccgggccactttgctcgcttctgtcgatgtcgcgctggagcatgccgaattgttt
gcaggagacaatgatcagctcggcttctttctcgatgaaggcttgacaattaagccgaag
tacgccgagacggaagaaatgccgctcgtcgacctgctggcacacgagaaggagacgctc
ggcatttacttttctgaccatccgttgagcgttcaccgcaagaagctggaccgtgcaggt
gcgctgccgattattcagctgctcgcctccagccgtaaaaaggcggctttgggcggactt
ttgacgaagatgaagacgatccgtacaaaaacgggacagacgatggcttttctggagctg
agcgatgaaagcggggaaatcgaagcggttgtttttcctgaacagttcagacagctttcc
ccgatcctggaagaaggcgtatcgctttttgcagaaggacgtcttgagacaaggaatgaa
aagcgccagctgatcatcgccggggcatcgcttgtcgaatcgcttcatgctaaaaagcag
ccgtccgtctatattaaagtggaggaaagtcagcacacccacgatatctttaagaaaatc
agcagcatcctgcttgaacacaaaggggaaacgccggtctgcgtctattatgaaaaacgg
aaacaaacgatgcagctgccggaaagctacaacatcaaggctgaccacgctgccctctac
aggctgaaaagcgttgtaggtgagaaaaatgtcgtgctcagatag
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