Bacillus paralicheniformis: BaLi_c39720
Help
Entry
BaLi_c39720 CDS
T02694
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blh
Bacillus paralicheniformis
Pathway
blh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BaLi_c39720 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blh03021
]
BaLi_c39720 (rho)
03019 Messenger RNA biogenesis [BR:
blh03019
]
BaLi_c39720 (rho)
Transcription machinery [BR:
blh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BaLi_c39720 (rho)
Messenger RNA biogenesis [BR:
blh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BaLi_c39720 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
NACHT
AAA_22
AAA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AGN38284
LinkDB
All DBs
Position
complement(3959680..3960963)
Genome browser
AA seq
427 aa
AA seq
DB search
MKDVSISSLENMKLKELYELARHYKVSYYSKLTKKELIFAILKANAEQEDLLFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVEA
VNGDDPESAKERVHFPALTPLYPDRQMVLETKPNHLSTRIMDMMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITTNHPEAELIVLLIDERPEEVTDIERSVAGDVVSSTFDEVPENHIK
VAELVLERAMRLVEHKKDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPGAFHRPKRFF
GAARNIEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLVPKEHLDRLWSIRKTMSDTPDFVEKFMRKMKKTKTNQEFFDILIQEWKQA
NMSAARR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatgtatccatttcatctttggaaaatatgaaattaaaagagctgtatgagctt
gcaaggcattataaagtctcttattacagcaaactgacaaaaaaggaactgatttttgcc
attctgaaagcaaacgccgaacaggaagatctgctgttcatggaaggcgtattggaaatc
atccagtctgaagggttcggctttctcagaccgatcaattattcccctagttcagaggat
atctatatttccgcttcgcaaatccgccgttttgatttgagaaacggtgacaaagtgtcc
ggaaaggtccgtcctccaaaagaaaacgaacggtattacggccttctgcatgttgaagcg
gttaacggcgacgatcctgaatcggcaaaagaacgcgtgcactttccagcgttaacgcca
ctttatccagaccgccagatggtgcttgaaacgaaaccgaatcacttgtcaacacggatc
atggacatgatggcgccggtcggctttggacagcgcggtctgatcgtcgctccgcctaaa
gcaggtaaaaccatgcttttgaaagagatcgcgaacagcatcacaaccaaccatccggag
gcggagctgatcgtgcttcttatcgatgaaaggcctgaggaagtgaccgatatcgaacgt
tcggttgcaggagacgtcgtcagctccacgtttgacgaagttcctgaaaaccacatcaag
gtggccgagcttgtattggaacgtgcgatgaggcttgtcgaacataaaaaggacgtcatc
attttaatggacagcattacaaggcttgcccgcgcttataacttagtcattccgccgagc
ggccgaacgttgtcagggggaatcgatcccggcgctttccaccgtccaaagcgtttcttt
ggagcagcccgcaacattgaagagggcggcagtttaacgatcttggcgaccgctcttgtc
gacacgggctcgcggatggatgacgtcatctatgaagaatttaaagggacagggaacatg
gagcttcatcttgaccgttctcttgcggaaagaagaatctttcctgccattgatattcgc
cgttcgggtacgcgtaaagaagagcttctcgttccgaaagagcaccttgaccgtctgtgg
tctatccggaaaacgatgtctgacacgcctgatttcgtcgaaaaattcatgagaaaaatg
aaaaagacgaaaacgaatcaggagtttttcgatattctgatccaggaatggaagcaagcg
aatatgtcggctgcaagacgctga
DBGET
integrated database retrieval system
