Bacillus licheniformis ATCC 14580: BL01127
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Entry
BL01127 CDS
T00197
Symbol
recJ
Name
(GenBank) RecJ exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bli
Bacillus licheniformis ATCC 14580
Pathway
bli03410
Base excision repair
bli03430
Mismatch repair
bli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BL01127 (recJ)
03430 Mismatch repair
BL01127 (recJ)
03440 Homologous recombination
BL01127 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bli03400
]
BL01127 (recJ)
DNA repair and recombination proteins [BR:
bli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BL01127 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BL01127 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BL01127 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF4168
Motif
Other DBs
NCBI-ProteinID:
AAU24394
UniProt:
Q65GQ7
LinkDB
All DBs
Position
complement(2779052..2781400)
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AA seq
782 aa
AA seq
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MLASKMRWDVQTPDKEKVEQLAGRLGITPLAASLLVMRGYDTADKASSFLYGNDARFHDP
YLLKDMEKAVRRIKQAISDQEKIMIYGDYDADGVTSTTVLLQMLKKCSAQADFYIPDRFK
EGYGPNEAAFRGIKESGYSLIITVDTGIAGVHEAEVAKELGIDLIITDHHEPGPVLPDAY
AIIHPKQPGCGYPFKELAGVGVAFKLAHALNGELPEDLLDLCAIGTIADLVPLHDENRQI
AKRGMEQFRKTKRPGLKALAKIAGAEIHNADEETIGFQIAPRLNAVGRIEQADPAVYLLN
TEDEREAEELAEDINALNKERQKIVNQMTEEAVQMIEEEGLDQPVIVVARPGWNPGVVGI
VASKLVERFYRPAIVLGVDEEKGIAKGSARSIKGFDLFQNLSECRDILPHFGGHPMAAGM
TLNLEDVSALRERINRQAEAVLTEADFIPVQDVDLCCRLEDISVDSIAEMNLLAPFGTGN
PKPFVLVSDVKIDDARKIGANKNHLKLVLADDGNKLDCIGFYKGDIEEGIVPGAKISIVG
ELSINEWNNRKKPQLMIKDAAVNEWQLFDLRGKRSWEEKILKLDPAKRACICFREETKAK
LAGTGLEEELTVISGPEDAERLDLESRYAVFIDIPQSLDIFDHVINGKKLERIYLIFYQS
DEHFFSTFPTREYFKWYYAFLLKRGSFDLPKYGGELARHKGWTKDTIDFMTKVFFELGFV
TIENGVLSVVYHAEKRDLTDSETYREKQRLIELEQKLIYSSADELKQWLDKRMAEKAGAY
KV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgttagcgtcaaaaatgcgttgggacgtgcaaacgcccgacaaagaaaaggtggagcag
ctcgccggaaggttaggcattactccccttgccgcctcattgcttgtcatgagaggttac
gatacagccgacaaagcatcttcatttttatatggcaatgatgcacgttttcacgatcct
tatctgctgaaagatatggaaaaagctgtacggcgaatcaaacaggcaatttcagatcaa
gaaaagattatgatttacggcgattatgatgcggacggtgtgacaagcacgactgtcctt
ttgcaaatgttgaaaaaatgttcagcacaagccgatttttatatacctgaccgctttaaa
gaagggtacggtccgaatgaagcggcctttcgcgggatcaaagaatcaggctattcattg
atcattacagttgacacaggcattgccggcgttcatgaagctgaagtcgctaaagagctc
ggcatcgacctgatcattacggatcaccatgagccgggtcccgttttgccggatgcttat
gcgatcattcatccgaaacagccgggctgcggctatccatttaaagagcttgccggcgtc
ggtgtggcatttaagcttgcccatgccttgaacggagagcttccggaagatttgctcgac
ctttgtgcgatcggtacgattgccgatcttgtgccgcttcatgatgaaaacaggcagata
gccaagcgcggcatggaacagttcaggaaaacgaagcgtccaggattaaaagcgctggcg
aaaattgccggagcggagatacataacgcggatgaagagaccatcggttttcaaatcgcg
ccccgcttaaacgcggtcggcagaattgaacaggctgacccggccgtttacctcctgaac
acagaagacgaaagagaagcggaagagcttgctgaggacatcaacgccttgaacaaggag
cgccaaaaaatcgtcaatcagatgacagaggaagccgttcagatgatcgaggaggaaggc
cttgaccagcctgtgatcgtcgtagcgcggccgggctggaatcctggcgtcgtgggaatc
gtggcttcaaagcttgtcgagcggttttacaggcccgccatcgtccttggcgtcgatgaa
gaaaaaggaattgccaaaggatctgcgcgcagcatcaaaggatttgatttatttcaaaac
ctttccgagtgccgggatattctcccgcacttcggcggccacccgatggcagccggaatg
acgctcaacctggaagacgtttcggctctgagggagagaatcaaccgtcaggctgaagcg
gttctgaccgaggcagattttatccccgtccaagacgtcgatttgtgctgccggctcgaa
gatatatcggttgacagcattgccgaaatgaacttgctggcgccgttcggcacgggaaac
ccgaagccgttcgttcttgtcagcgacgtaaaaattgatgacgccagaaaaatcggcgcc
aacaagaatcatttgaagcttgtgcttgcagacgacgggaacaagctcgattgcatcgga
ttttataaaggcgatatcgaagaaggaatcgttcctggagcaaagatctcgattgtcggg
gaactgtcgattaacgaatggaataacagaaaaaaaccgcagctgatgatcaaagatgcg
gccgtcaatgaatggcagctgtttgatctgcggggaaaacggtcatgggaagaaaaaata
ttgaagctggaccctgcgaaacgggcgtgcatctgcttccgcgaggaaacaaaagcaaag
ctggcagggacaggccttgaagaagagctgaccgtcatcagcggccctgaagatgcagag
cggctcgaccttgagagccgttatgcggtatttatagatattccgcagtcgctcgacatc
tttgatcatgtaataaacggcaaaaagctggagcgcatttatctgattttttatcaatca
gacgaacattttttctcaacattcccaacaagggaatattttaaatggtactatgctttc
ctcctgaaaagaggttcttttgacttgccgaaatacggcggagagcttgccagacataaa
ggctggacaaaagacacaattgattttatgacaaaggtgttttttgagctcggttttgtt
acaatagagaatggtgttttatctgttgtttatcatgccgaaaagcgcgatttaacagat
tctgaaacctaccgggaaaaacagcgcctgattgaattggagcaaaagctcatttattct
tcggcggatgagcttaaacagtggctggataagcggatggcggaaaaagccggcgcttat
aaagtatga
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