Bacillus licheniformis ATCC 14580: BL01281
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Entry
BL01281 CDS
T00197
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bli
Bacillus licheniformis ATCC 14580
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bli03032
]
BL01281 (topA)
03400 DNA repair and recombination proteins [BR:
bli03400
]
BL01281 (topA)
Enzymes [BR:
bli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BL01281 (topA)
DNA replication proteins [BR:
bli03032
]
Prokaryotic type
DNA Topoisomerases
BL01281 (topA)
DNA repair and recombination proteins [BR:
bli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BL01281 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AAU23367
UniProt:
Q65JN7
LinkDB
All DBs
Position
1789047..1791122
Genome browser
AA seq
691 aa
AA seq
DB search
MSEYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQMGVDIEQNFEPKYITIRGK
GPVLKELKTAAKKAKKVYLAADPDREGEAIAWHLAHSLDLDLNSDCRVVFNEITKDAIKE
SFKHPRMINMDLVDAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVALRLIIDREK
EINDFIPEEYWTIEGSFLKGKETFEASFFGINGEKHQLKSEDDVKQILSRIKGNKFEVKK
VTKKERKRNPALPFTTSTLQQEAARKLNFRAKKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISNTAQEEAASFIGEQYGKEFLGSKRKPAKKNENAQDAHEAIRPTSVLRKPSDLK
AVLGRDQLRLYKLIWERFVASQMAPATLDTMSVDLENNGLTFRANGSKVKFSGFMKVYVE
GKDDQMEEKNKMLPDLAEGDTVLSKDIEPEQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQKRGYVALDNKRFIPTELGEIVLDLIMEFFPEIINVEFTAKMEKELDDVEDGN
IQWVQIIDSFYKDFEKRVEKAEAEMQEVEIEPEYAGVDCEACGHPMVYKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPSCKTGNIVERKSKKRRIFYGCDRYPECEFVSWDKPLERKC
PKCEDMLVEKKLKKGVQVQCVNCDYKEEQQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatacttagtcatcgtggaatcgcctgcaaaggcaaaaacgattgagcgatac
ttaggaaaaaaatataaagtaaaagcctcgatggggcacgtcagagatttgccgaaaagc
cagatgggcgttgacatcgagcagaactttgaaccaaaatacattacgatccgcgggaaa
ggccccgtgttgaaagaattaaaaacggccgccaaaaaggcaaaaaaagtttatctcgca
gccgaccccgacagggaaggggaagcgattgcgtggcatttggcgcacagccttgatttg
gacctgaattccgactgccgcgtcgtatttaatgaaattacaaaagatgcgatcaaagaa
tcatttaagcatccgcgcatgatcaatatggatcttgtcgacgcccagcaggcgagaaga
attctggaccgccttgtagggtacaaaatcagtccgatattatggaaaaaagtaaaaaaa
ggcttgagtgcgggacgtgtccaatctgttgcgctccgccttatcattgaccgggagaaa
gaaatcaacgattttataccggaagaatattggacaattgaagggtcttttctcaaaggt
aaagaaacgtttgaagcgagcttcttcggaatcaacggggaaaagcaccagctgaaaagc
gaagatgatgtgaagcaaatcctatcccggatcaaagggaacaaatttgaggtcaaaaag
gtaacgaaaaaagaacggaagcgaaatcctgcgctcccatttacgacgtcgacgcttcag
caggaagcggcgcgcaaattgaatttccgggcaaagaaaacgatgatgatcgcccagcag
ctttatgaaggaatcgatctcggcaaagaaggaacggtcgggttaatcacttatatgaga
acggattcaacccgtatctcgaatactgctcaagaagaagcggcatcattcatcggcgaa
cagtacggaaaagaatttttgggtagcaagcgaaagccggccaaaaagaatgaaaacgcc
caggatgcccacgaagcgatcaggccgacctcggtgctcagaaagccttccgatctgaag
gcggtattgggaagagaccagcttcggctatacaagctgatctgggagcgctttgtcgca
agccaaatggctccggcgacactggatacgatgagcgtcgaccttgaaaacaacgggttg
acatttcgggcaaacggcagtaaagtcaagttttcaggcttcatgaaagtgtacgttgaa
ggcaaagacgatcagatggaagagaagaataagatgcttccggatctcgctgaaggcgat
accgtgctttcaaaagacatcgagcccgaacagcacttcacacagccgcctccgcgctat
acggaagcaaggctggtcaaaacgcttgaagaactgggaatcggacgtccatccacatac
gcgccgacgcttgacacgatccaaaagcgcgggtatgtcgcccttgataataaacgcttt
attccgactgagctcggtgaaattgtgcttgacttgatcatggagtttttccctgagatt
attaacgttgagttcaccgccaaaatggaaaaagagcttgatgacgttgaagacggaaac
attcaatgggtgcagatcatcgattccttttacaaggactttgaaaagcgtgttgaaaaa
gcggaagccgagatgcaggaagtggagatcgaaccggagtatgcaggtgttgactgtgaa
gcgtgcggacatccgatggtctataaaatgggccggtacggcaaatttatggcctgctcc
aattttccggactgccgcaacaccaagccgatcgtaaaagagatcggcgtcaaatgccca
tcatgcaaaaccggcaacatcgtcgagcgcaaatcgaaaaaacgccgcattttttacggc
tgtgaccgctatcctgaatgtgaattcgtatcatgggataaaccgcttgaacggaaatgt
ccgaaatgcgaggacatgcttgtggagaaaaagctcaaaaaaggcgttcaagtgcagtgc
gttaattgcgattataaggaagaacaacaaaagtag
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