Bacillus licheniformis ATCC 14580: BL01304
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Entry
BL01304 CDS
T00197
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bli
Bacillus licheniformis ATCC 14580
Pathway
bli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BL01304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bli03019
]
BL01304
03400 DNA repair and recombination proteins [BR:
bli03400
]
BL01304
Enzymes [BR:
bli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BL01304
Messenger RNA biogenesis [BR:
bli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BL01304
DNA repair and recombination proteins [BR:
bli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BL01304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AAU23737
UniProt:
Q65IL6
LinkDB
All DBs
Position
complement(2173687..2175468)
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AA seq
593 aa
AA seq
DB search
MLEKAEALLQHYFGYPSLRPGQKKAIQSVVSEKRDTACIMPTGGGKSICYQIPALLMEGT
TIVISPLISLMKDQVDALNQLGIQAAYVNSSLGHNEIAERLSVFKEGGYKLFYVTPERLT
SPEFIRAISHIHIPLVAIDEAHCISQWGHDFRPSYRHIEGFLNSLGTRPVVLALTATATP
EVHEDICTQLGIEKENTVFTGFSRDNLTFKILKGENRDRFIESYVEKNRSEAGIIYTATR
KEAERISSRLSQKGIAAGCYHGGMDDEERDRQQDLFLNDEISVMTATSAFGMGIDKSNIR
YVIHAQIPKNMESYYQEAGRAGRDGLDSECILLFSPQDIRLQRFLIEQSTEDEDIRAQDV
KKLRQMVDFCHTEGCLERFILSYFGEVPTEDCGRCGSCLDTRSITDVTKEAQMVLSCIIR
MGERFGKTMVAQVLAGSKNKKVTENGFQQLSTYGILKKRSIADISDFIEFLIADEYIKMS
DGTYPVLFVANKGRNVLLGREAVMRKEKMQTNQIVKDDELFERLRALRRKLAQEQGVPPF
VVFSDETLREMSGKVPLTDEELLSVKGVGEQKRVKYGAVFLQELQAYKTEKEA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgctagagaaagccgaagcactattgcagcactattttggctatccttcactgcgcccg
gggcagaagaaagccattcaatctgtcgtttctgaaaagcgagatacagcatgcattatg
ccgacgggcggaggcaaatcaatctgctaccaaattcccgcgctccttatggaagggaca
accattgtgatctctcctttaatttccttgatgaaggaccaggtggatgctttaaatcag
cttggaattcaagctgcgtacgtgaacagttctttaggccataacgaaatcgctgagcgg
ctctccgtatttaaggaaggcggctacaagctcttttatgtaacacctgagcggctgacg
tctcccgaattcattcgcgcgatttcccacattcatattccgctggtagccattgatgaa
gctcattgcatttcacagtggggacatgatttcaggccgagctacagacatattgaaggc
tttttaaatagcctcggcacccgcccggttgtattggcgttgacggctaccgcaacgccc
gaggttcatgaggatatttgcacacagctcgggatcgaaaaagagaacacggtttttacc
ggtttttcacgggataatttgacgtttaaaattttaaaaggcgaaaacagggaccgtttt
atcgaatcatatgtggagaaaaaccgctcagaggcgggaattatctatacagcgacaaga
aaggaagccgaaagaatatcaagccgcctctctcaaaaaggaattgcggccgggtgctat
cacggcgggatggatgatgaagaaagagaccggcagcaggatctctttttaaatgatgag
atcagtgtaatgacagcgacctcggcgtttggaatgggcatcgataaatccaatatccgc
tatgtgattcatgcccaaattccaaaaaatatggagagctactaccaggaggcgggacga
gccggacgcgacggccttgacagcgagtgcatcctgctgttttcccctcaggacattcgg
cttcagcggtttttaatcgaacagtcgacagaagatgaagacattcgggcgcaagacgtg
aaaaaactgaggcaaatggttgatttttgccatacggaaggctgtctcgaacggtttatt
ctttcttattttggcgaagttccaaccgaagactgcggcaggtgcggcagctgtctcgac
acccgaagcatcaccgatgtgacgaaggaggcacagatggtgctgtcctgcatcatccgc
atgggagaaaggttcggaaaaaccatggtggcgcaagttctggcaggttcgaaaaataag
aaagtgaccgaaaacggcttccagcaattatcgacttacggaattttaaagaaacggtct
attgccgacataagcgattttatagagtttttaatcgcagatgagtacatcaaaatgtcc
gacgggacatatcctgttctctttgtcgccaacaaggggcgaaacgttttgctcggccgg
gaagcggtgatgcgcaaagaaaaaatgcaaacaaatcaaatcgttaaagatgacgaattg
tttgaacggttaagggcgctgcgcagaaagcttgctcaggaacaaggcgtgcctcctttt
gttgtattctctgacgaaacgctgcgggaaatgagcgggaaagtccctctgacagacgaa
gagcttttgtcagtcaaaggagtgggagaacaaaaaagagtaaaatacggagctgtattt
ctacaggagcttcaagcctataaaactgagaaagaagcataa
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