Bacillus licheniformis ATCC 14580: BL02626
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Entry
BL02626 CDS
T00197
Symbol
rpoC
Name
(GenBank) RNA polymerase (beta subunit)
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bli
Bacillus licheniformis ATCC 14580
Pathway
bli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BL02626 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bli03021
]
BL02626 (rpoC)
03400 DNA repair and recombination proteins [BR:
bli03400
]
BL02626 (rpoC)
Enzymes [BR:
bli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BL02626 (rpoC)
Transcription machinery [BR:
bli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BL02626 (rpoC)
DNA repair and recombination proteins [BR:
bli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BL02626 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
RPOC_hybrid
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AAU21755
UniProt:
Q65PB4
LinkDB
All DBs
Position
124592..128191
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMNIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTDPANTPLEKKQLLSEKEYRAYLDKYGNKFQASMGAEAIHKLLQ
DIDLDKEVDMLKEELKTSQGQRRTRAIKRLEVLEAFRNSGNKPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLESVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERPGAVGEGMIFKDTDEALLAYQNGYVHLHTRVAVA
VNSLKNETFTEEQRSKLLITTVGKLIFNEILPPSFPYMNEPTKSNIEEKTPDRFFLDYGA
DVKEAIKNQEINPPFKKGILGKIIAEIFKRFHITETSKMLDRMKNLGFKYSTKAGITVGV
SDIVVLDDKQEILEEAQGKVDNVMKQFRRGLITEEERYERVISIWSAAKDTIQGKLMKSL
DEINPIYMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRETDCGTDRGILAKAITEGTEVIERLE
ERLVGRFARKPVKHPETGEVLVNENELIDEDKAIEIVEAGIEEVWIRSAFTCNTSHGVCK
RCYGRNLATGTDVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQELF
EARNPKGQATISEIDGVVAEINEVRDKQQEIVVQGEVESRSYTAPYNARLKVTEGEKISR
GQVLTEGSVDPKELLKVTDITTVQEYLLHEVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGDTEVLPGTLLDIHQFTEANKKVLLEGKRPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMLNYRKVKPVLQVQSSDEMVPAE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctggatgtgaacaattttgagtatatgaacatcggtctcgcttcacctgacaaaatc
cgttcatggtcttacggagaagtgaaaaagcctgaaacaatcaactatcgtactttgaaa
cctgaaaaagatggtctattctgcgagcgcattttcggtcctcaaaaggactgggaatgc
cactgcggaaagtacaagcgggttcgttataaaggcgtagtctgcgaccgttgtggagtt
gaagtaacccgggctaaagtccgtcgtgagagaatggggcatatcgagctggcagccccg
gtttctcacatctggtattttaaaggaattccgagccgtatgggtcttgtgctggatatg
tctccgcgcgcattggaagaagtcatttactttgcttcttacgtcgtaacagatccggcc
aatacaccgctcgagaaaaaacagcttctttctgaaaaagagtatcgggcgtacctcgat
aaatacggaaataaattccaagcgtcaatgggtgctgaagcgattcataagctccttcaa
gatatcgacctcgataaagaagtggatatgctgaaagaagagcttaaaacgtcacaagga
cagcgccgcacacgtgcgatcaaacgtctggaagtattggaagccttccgcaattccgga
aataagccgtcatggatgatcctcgacgttcttccggtcattccgcctgagctgcgacca
atggtacagcttgacggtggacgttttgcaacttccgatctgaacgatttgtatcgccgc
gtaatcaaccgtaacaatcgtttaaaacgtcttctggaccttggagcgccaagcattatc
gttcaaaacgaaaagcgcatgcttcaggaagccgtggacgcattgatcgataacggacgc
agaggacgtcctgttacaggtccaggaaacagaccgttaaaatccctttctcacatgctg
aaaggtaaacaaggccgtttccgtcaaaaccttctcggtaaacgtgttgactactcagga
cgttcggttatcgtcgtaggtccgaacctgaaaatgtatcaatgcggtcttccgaaagaa
atggcgctggaactgttcaagccattcgtcatgaaagagcttgttgaaaagggccttgcc
cacaatattaagagcgcgaagcgtaaaattgagcgcgttcagccggaagtctgggatgtc
cttgaatcagttatcaaagaacaccctgtgcttctcaaccgtgcacctacgcttcacaga
ttaggtattcaagcgtttgaaccaacgcttgttgaaggccgtgccatccgtcttcatccg
cttgtatgtacggcatacaacgctgactttgacggtgaccaaatggcggttcacgttcct
ttatcagcagaagcgcaagctgaggcgcgcatccttatgcttgctgcgcaaaacatcctg
aaccctaaagacggaaaaccggttgttacaccgtctcaggatatggtacttggaaactac
tatctgacgctagaacgccctggtgcagtcggcgaaggtatgattttcaaagatacggat
gaagcgctgcttgcttaccaaaacggatatgttcatttgcatacgagagtagccgtcgcg
gttaactcattgaaaaatgaaacgtttaccgaagaacagcgttccaagctgctcattaca
actgtcggaaaactgatcttcaacgaaattcttccgccgtcgttcccatacatgaacgaa
ccgacgaagagcaacattgaagaaaaaacgcctgaccgtttcttcttggattacggtgca
gatgttaaagaagccattaagaaccaagaaatcaacccgccgttcaaaaaaggcattttg
ggtaaaatcattgcggagatcttcaaaaggttccatattacagaaacatcaaaaatgctt
gaccgcatgaaaaacctcggctttaaatactctacaaaagccggaattacggtcggtgtt
tccgatatcgtcgtattggacgacaaacaggaaatccttgaagaagcgcaaggaaaagtc
gataacgtgatgaagcagttcagacgcggtctgattactgaagaagagcgttatgaacgg
gtcatttccatctggagtgcagctaaggatacgatccaaggcaagctgatgaaatccttg
gatgaaatcaacccgatttacatgatgagtgattccggagcccggggtaacgcatcaaac
tttacgcagcttgcgggtatgcgcggtctgatggccaacccggccggacggatcatcgaa
cttccgatcaagtcaagtttccgtgaaggtttaacggtactcgagtactttatctctact
cacggtgcgcgtaaaggtcttgcggatacggcccttaagacagccgactcaggttacctg
acacgccgtctcgtagacgtagcccaagacgtcatcattcgtgagactgactgcggcaca
gaccgaggcattcttgccaaagccatcacggaaggcacagaagtgatcgagcgtcttgaa
gagcgtcttgtcggccgattcgcgagaaagcctgttaaacatccggaaacaggtgaagtg
ctcgtgaatgaaaacgagctgatcgacgaagataaagcgattgaaattgtcgaagcaggc
attgaagaagtgtggatccgctccgcatttacatgtaatacgtcacatggtgtatgtaaa
cgatgctacggccgcaacctggcaacaggaaccgatgtcgaagtcggagaagcagtcgga
atcatcgctgcccagtccattggtgagccgggtacacagttaacgatgcgtaccttccat
acgggcggggttgccggagacgatattacacaaggtttgccgcgtatccaggaattgttt
gaagcgcgaaaccctaaaggtcaagcgacgatctctgaaattgacggtgtcgtggccgaa
atcaatgaggttcgcgataaacagcaggaaatcgtcgttcagggcgaagtcgaaagccgt
tcatatacggcgccttacaacgcgcgcttgaaagtcactgaaggagagaagatttctcgt
ggtcaagtgctgacagaaggttcggttgatccgaaagagcttctgaaagtcactgacatc
accacggtccaagaatacctgcttcatgaagtgcagaaggtttatcgtatgcagggggtt
gaaatcggagataagcacgtcgaggttatggttcgccagatgcttcgcaaagtgcgcgtc
atcgatgccggcgacacggaagtgctgccaggcacgctgctcgatattcaccagtttaca
gaagcaaacaaaaaagttctgcttgaaggcaaacgccctgcaactggccgtccggtgctt
ctcggtatcaccaaagcatcgcttgaaacggattccttcctgtctgccgcgtcattccag
gaaacaacacgtgtcctgacagatgcagcgatcaaaggaaaacgtgatgagcttctcggc
ctgaaagagaatgttatcatcggtaagcttgttcctgctggaacgggtatgctgaactat
cgtaaagtgaagccggtattgcaagtccaatcatctgatgaaatggttccggctgaataa
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integrated database retrieval system
