Brevibacterium aurantiacum: BLSMQ_1211
Help
Entry
BLSMQ_1211 CDS
T04775
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
blin
Brevibacterium aurantiacum
Pathway
blin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
blin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BLSMQ_1211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blin03021
]
BLSMQ_1211
03400 DNA repair and recombination proteins [BR:
blin03400
]
BLSMQ_1211
Enzymes [BR:
blin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BLSMQ_1211
Transcription machinery [BR:
blin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BLSMQ_1211
DNA repair and recombination proteins [BR:
blin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BLSMQ_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5700
Motif
Other DBs
NCBI-ProteinID:
AOP52921
UniProt:
A0A1D7W1M5
LinkDB
All DBs
Position
1310093..1313965
Genome browser
AA seq
1290 aa
AA seq
DB search
MPDVNFFDELRIGLATAESIRGWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVDEDSRHRDLPSLQNKIDVEKQQIGTRRDADIDRRAKKLEED
LAALEADGGSAPAKKKLRDVAEKEMEKLRKNADREVDRLEQVWDRFKSLKVNDLEGDESL
YREMFHRFGLYFTGAMGAEAIQKRLLDFDLEAESEKLRELIATGKGQRKTRALKRLKVVN
AFLTTDNNPEGMVLDVVPVVPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLHLHQCGLPKTMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQH
PQVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCSAFNADFDGDQ
MAVHLPLSPEAQAEARVLMLSANNILKPSDGKPVTMPSQDMIIGLYHLTSERKGLAGEGR
SFTGLGEAIMAFDRGELDLGSVITIRLENVVPGDDLEVPEGWEAGDPLDVQTTLGRAQFN
DYLPADYSFMNSTIDKKALSRIINYLAEEYPKVEVAQTLDNFKAGGFYWATRSGITISMS
DVVSPEAKTEIIDDAEAFDTKVQQQYELGALTDDERRNELVKLWTETTEKVDQVMRTNFP
EENSVLRLVESGASGNWMQVRQLAGMRGLVTNPKGEIIPRPIVSNYREGLSVLEYFIASH
GARKGLADTALRTADSGYLTRRLVDVSQDVIIRTAEADTNKGITLPAAERDHEGNLVPHE
YAETSLYGRLTVSDVSDADGNVIVPAKTDVTAETIDTLVAAGIEELKVHSVLTADSDTQI
SAMHYGRSMATGKLVDIGEAIGTVAAQSIGEPGTQLTMRTFHTGGAAASTGDITQGLPRV
TELFEARTPKGFAPIAEATGRAKIDDSRKTRFVVITPDDGGEEIEHAVSKRARLLVEDGQ
NVKAGEQLVIGAVDPKQVLRIRGRREAERFLVEQVQKVYRSQGVGIHDKHIEVIVRQMLR
RVTVIESGDTNLLPGELVDRGRYQAENRRVVAEGGQPASARDELMGITKASLATDSWLSA
ASFQETTRVLTEAAMEGKSDTLLGLKENVILGKLIPAGTGLQTHRDIVVEPTEEAKAEMF
TNSYGDFYAGIGSDSGSAIPLEDYDYGAFS
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgacgtcaatttctttgatgagctacgtatcggtcttgccactgcggaatccatc
cgcggctggtcacacggtgaggtgaaaaagcctgagaccatcaactaccgcacactcaag
cccgaaaaggacggactcttctgcgagaagatcttcggtccgacccgcgactgggagtgc
gcctgcggcaaatacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcacccgcgccaaggttcgccgtgagcgcatgggacacatcgagctggccgcaccg
gtcactcacatctggtacttcaagggcgtcccctcgcgcttgggctacctgctggacctg
gcaccgaaggacctcgagaaggtcatctacttcgccgcctacatgatcacctcggtggac
gaggattctcgccaccgcgatctgcccagcctgcagaacaagatcgacgtcgaaaagcag
cagatcggcactcgccgtgacgctgacatcgatcgtcgtgccaagaagctcgaagaggat
ctcgcagctctcgaggccgacggcggctccgccccggccaagaagaagctgcgcgatgtc
gccgagaaggaaatggagaagctgcgcaagaacgccgaccgtgaggtcgaccgccttgag
caggtgtgggaccggttcaagagcctcaaggtcaacgacctcgaaggcgacgagagcctg
taccgcgaaatgttccaccgtttcggtctctacttcacgggtgccatgggcgccgaggcg
atccagaagcgtctgctcgacttcgacctcgaagccgaatccgagaagctgcgcgaactc
atcgccaccggcaagggccagcgcaagacccgcgccctgaagcgtctcaaggtcgtcaac
gcgttcctgaccactgataacaaccccgagggcatggtcctcgacgttgttcccgtggtg
ccgccggaactgcgcccgatggtgcagctcgacggtggacgtttcgccacgtctgacctc
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgtctcaagcgtctgttggacctc
ggtgctcccgagatcatcgtcaacaacgagaagcggatgctgcaggaagccgtcgactca
ctgttcgacaacggccgtcgcggccgtccggtgaccggaccgggcaaccgcccgctgaag
tcgctgtcggacatgctcaagggcaagcagggacgtttccgtcagaacctcctgggcaag
cgtgtggactactcgggccgttcggtcatcgtggtcggtccgcagctgcacctgcaccag
tgtggtctgcccaagaccatggctctggagttgttcaagcccttcgtgatgaagcgcctg
gtcgatctcaaccatgcacagaacatcaagtcggccaagcgcatggtcgagcgtcagcac
cctcaggtgtgggacgtcctcgaagaggtcatcaccgaacacccggtgctgctcaaccgt
gcaccgaccctgcaccgtctgggcatccaggcgttcgaaccgcagctcatcgagggtaag
gccatccagctgcaccccctcgtctgctcggccttcaacgctgacttcgacggtgaccag
atggcagtccacctgccgctgagccccgaagctcaggcagaggcacgcgtgctgatgctc
tcggccaacaacatcctcaagccttcggacggcaagcccgtgaccatgccctcgcaggac
atgatcatcggtctgtaccacctgacctccgagcgcaagggcctggccggcgagggacgc
tccttcaccggtctcggcgaagccatcatggccttcgatcgtggcgaactggacctcggt
tcggtcatcacgatccgtcttgagaatgtcgtccccggcgacgatcttgaggttcccgaa
ggttgggaagccggcgatccgctggacgtgcagaccacactgggccgcgcacagttcaac
gattacctgcctgccgactactcgttcatgaactccacgatcgacaagaaggcactcagc
cgcatcatcaactacctggctgaggaataccccaaggtcgaggtcgcgcagaccctggac
aacttcaaggccggcggtttctactgggcgactcgttcgggaatcacgatttcgatgtcc
gatgtggtctcacccgaggccaagaccgagatcatcgacgacgccgaggcgttcgacacg
aaggttcagcagcagtacgaactcggtgcactcaccgacgacgaacgccgcaacgaactg
gtcaagctgtggaccgagacgaccgagaaggtcgaccaggtcatgcggacgaacttcccg
gaggagaactcggttctgcgtctggtggagtccggtgcatccggtaactggatgcaggtc
cgtcagctggccggtatgcgtggactggtgacgaacccgaagggtgagatcatccctcgc
ccgatcgtctcgaactaccgtgagggactgtcggtcctcgagtacttcatcgcctcgcac
ggtgctcgtaagggtctggccgataccgctctgcgtaccgctgactccggttacctgacc
cgtcgactcgtcgacgtgtcgcaggacgtcatcatccgcaccgctgaagccgataccaac
aagggcatcacgctgcctgcagccgagcgcgaccacgagggcaacctcgtgccgcacgag
tatgcagagacgagcctctacggtcgcctcacggtctcagacgtctccgacgccgatggc
aatgtcatcgtgccggcgaagaccgacgtgaccgcagagacgatcgatacgctggtcgct
gccgggatcgaagagctcaaggttcactccgtgctcaccgccgattccgacactcagatc
tcggccatgcactacggtcgttcgatggccaccggaaagctcgtcgacatcggcgaagca
atcggcaccgtcgctgcccagtcgatcggtgagccgggaacccagctcaccatgcgtacc
tttcacacgggtggtgcggcggcgtccacgggtgacatcacccagggtctgccgcgtgtg
accgagctcttcgaagctcgcacaccgaagggcttcgctcccatcgccgaggcgaccgga
cgtgccaagatcgacgacagccgcaagactcgcttcgtcgtcatcacccccgatgacggt
ggcgaagagatcgagcacgcagtctccaagcgtgcccgcctcctcgtcgaggacggacag
aacgtcaaggccggcgagcagctggtcatcggcgctgtcgatccgaagcaggtgctgcgc
atccgcggtcgccgtgaggccgagcgcttcctcgtcgagcaggtgcagaaggtgtaccgc
tcgcagggcgtgggcatccacgacaagcacatcgaggtcatcgtgcggcagatgctgcgt
cgcgtgaccgtgatcgagtcgggcgacacgaacctgctgcccggcgagctggtcgaccgt
ggccgttaccaggccgagaaccgccgtgtggtcgccgaaggcggccagccggcatcggct
cgtgacgagctcatgggcatcacgaaggcctccttggccaccgattcgtggctgtccgcc
gcgtccttccaggagacgacacgcgtcctcaccgaggccgccatggaaggcaagtcggac
acgctgctgggtctcaaggagaacgtcatcctcggtaagctcatccctgccggcaccggc
ctgcagactcaccgcgacatcgtggtggagccgaccgaagaggcgaaggccgagatgttc
acgaacagctacggcgacttctacgcaggcatcggctccgattccggatccgccatcccg
ctggaagactacgactacggcgccttcagctga
DBGET
integrated database retrieval system
