Brevibacterium aurantiacum: BLSMQ_1986
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Entry
BLSMQ_1986 CDS
T04775
Name
(GenBank) DNA polymerase III epsilon subunit-related protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
blin
Brevibacterium aurantiacum
Pathway
blin03030
DNA replication
blin03430
Mismatch repair
blin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLSMQ_1986
03430 Mismatch repair
BLSMQ_1986
03440 Homologous recombination
BLSMQ_1986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blin03032
]
BLSMQ_1986
03400 DNA repair and recombination proteins [BR:
blin03400
]
BLSMQ_1986
Enzymes [BR:
blin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLSMQ_1986
DNA replication proteins [BR:
blin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLSMQ_1986
DNA repair and recombination proteins [BR:
blin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLSMQ_1986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
GIY-YIG
DEDDh_C
TraP
UVR
Motif
Other DBs
NCBI-ProteinID:
AOP53696
UniProt:
A0A1D7W3T2
LinkDB
All DBs
Position
complement(2153269..2155014)
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AA seq
581 aa
AA seq
DB search
MSAPFDRTPTAIESSQLSFDALGTPLHEVTFVIVDLETTGTTAGKSEITEIGAVKTRGGE
VLGEFQSLVKPEESVISPFVARLTGITHAMVDDAPSIRSVLPSFLEFCVGAVLVAHNAPF
DIGFLRSACEKLDYHWPQPTVLDTVTLSRRVVSRDEVRNHKLSTLAAHFGTEVSPDHRAL
SDAKATGEVLHRVLERFGGYGITTLEELATVRQAGWAKRQAKSHLAKGVPAEPGVYMFLD
GTRRVLYIGKSGNMARRVRGYFNASENRGRMAEMITAAQEVSCLPCAHALEAEVREIRLI
GELAPPYNRRSKNPERNSWIVLSDEEYPRLSVVRANTALEKSPATPLGPFRSRKTAQAVK
ELLDTLYPVKRCTAKITASNLASHRPCVSSQVGQCGGPCAGVLDRQAYLDDIAALFEVMA
GDFTSLRSLCTQRMSRLADEARYETAAEVRDAMRSALSCAARAESVQALRAVPEILAHAP
GPEGGIDLAVIRHGKLAAASHVRGSQAIDESFAAIAATAEWVPAPGRLPADTDSLPEETR
LLSQWLQSATLTSAQGAWSLPRAGANYHAQESGTVRLSDPV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccattcgaccgaactccgacagcaatcgaatcctcccagctgtccttcgat
gcccttggcacaccgctccatgaggtcactttcgtcatcgtggacttagagacgacaggc
acgaccgcaggaaagtcggagatcactgagatcggtgcggtgaagacgcgcggcggtgag
gtcctcggcgagtttcagtctctggtcaagcccgaagaatcggtgatcagtcccttcgtg
gcacggttgaccggcatcacacacgccatggtcgacgatgcaccgtccattcgttcggtc
ctccccagctttctggaattctgcgtcggcgcggtactggtcgcccacaatgcccccttc
gatatcggattcctccgctcggcctgtgaaaagctcgactaccactggccccagccgaca
gtcctcgacaccgtcactctgtctcggcgagtggtgagtcgagacgaggtgcgcaatcac
aaactgtcgaccctcgccgctcatttcggaaccgaggtctcacccgaccaccgtgcgctg
tccgatgccaaggccacgggagaggtgctgcaccgggtcctcgaacggttcggaggctac
ggcatcacaacgctcgaagagttggccacggtacgccaggcagggtgggcgaaacgccag
gccaagtcgcacctggctaagggagttccggctgagccgggtgtctacatgttcctcgat
ggaactcgccgtgtcctctacatcgggaagtccgggaacatggcccggcgcgtccgaggc
tacttcaatgcctcggagaaccgaggccgaatggctgagatgatcactgctgcccaagaa
gtcagctgcctgccgtgcgcgcatgccctcgaagccgaagtcagagagatccgcctgatc
ggcgaactcgccccgccgtacaaccgtcgctcgaagaaccctgaacgcaattcctggatc
gttctcagcgatgaggaatatccacgtctgtcagtggtccgggcgaacacggcattggag
aagtcacccgcaactccgctcggcccgttccgatcacgcaagacagcacaagcggtgaag
gaacttctcgataccctctacccggtcaaacgatgcacagcgaagatcactgcctccaac
ctcgcctctcaccgtccgtgtgtgagctcccaagtcggtcagtgcggaggaccctgtgcc
ggggtgctggacaggcaggcctacctggatgacatcgccgcactgttcgaggtcatggcc
ggagacttcacttctctgcgcagtctgtgcactcagcgaatgtcgcggctggctgacgaa
gcgaggtacgagaccgccgctgaggtgcgcgacgctatgcgctcggcgctctcgtgtgcg
gctcgggccgaatcggttcaggcgctgcgggctgtccctgagatccttgcgcacgccccg
ggacccgagggtgggatcgatctcgccgtgatccgtcacggaaaattggccgcagcctcg
cacgtccgtggctcgcaggcgattgacgagtcattcgccgccatcgcagcgaccgcagaa
tgggtgcctgctccaggtcgtcttccagccgacaccgattctctcccagaggagacccgg
ctgctgtcccagtggctgcagtcagccacgctgacatcagcgcagggggcgtggtcgctc
ccccgcgctggtgccaactaccatgcgcaggagtcagggacggttcgtctcagcgaccct
gtgtga
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