Brevibacterium aurantiacum: BLSMQ_2283
Help
Entry
BLSMQ_2283 CDS
T04775
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
blin
Brevibacterium aurantiacum
Pathway
blin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLSMQ_2283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blin03019
]
BLSMQ_2283
03009 Ribosome biogenesis [BR:
blin03009
]
BLSMQ_2283
Enzymes [BR:
blin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BLSMQ_2283
Messenger RNA biogenesis [BR:
blin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLSMQ_2283
Ribosome biogenesis [BR:
blin03009
]
Prokaryotic type
rRNA helicases
BLSMQ_2283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
Cas3-like_C_2
UvrA_inter
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AOP53989
UniProt:
A0A1D7W4L5
LinkDB
All DBs
Position
2476338..2478158
Genome browser
AA seq
606 aa
AA seq
DB search
MTDVSSSDDPTTPKFSELGLHPLVLQAVQAQGYETPTPIQAETIPALVEGRDVIGLAQTG
TGKTAAFALPALSDLAEAGRANDGPFALVLTPTRELAIQVAEAFTSYATNLDDFSVLPIY
GGQAYGPQLSGLKRGAQVVVGTPGRVIDHLKKGSLKLGSLRHLILDEADEMLKMGFAEDI
EEIFSQSGDSRQVALFSATMPTSIHRLTGKYLNNPKEVRVASKSQTGSNIRQRYHMVQHS
HKLDALTRILEVEEYEGIIMFVRTKQATEELAEKLRARGFKASAINGDIPQQARERTIDM
LRNGKVDILVATDVAARGLDVERITLVVNFDIPHDTESYVHRIGRTGRAGRSGEAILFVT
PREQRLLGSIERATKQKVEQLKMPSVEELTNTRVEKFTKRIDDVLATTELTELATVIEQY
ELSRNVPATDIAAALASLVLESNTLKADPMPEPSRGKPGRDRDSGGRDGKPGRERSSRPR
DENMTTYRLAIGRNERLQPGAVVGAIANEGGLTSKEIGHIDIRSNHTLVDLPKDLDSSVM
RKLSNTQIQGRPIDIRPDSGRPARPFKKRNFDKQPGDSRNFRNDRRGGAKKFSNDRFGGE
RSHDRY
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtgtcctcatccgacgatccgacaacaccgaagttctccgagctgggtctc
cacccgctcgtcctccaggcagttcaggctcagggctacgaaaccccgaccccgatccag
gccgaaacgattcccgcactggtcgaaggccgcgacgtcatcggactcgcccagaccggt
accggcaagacagccgctttcgccctgccggcactgtccgacctcgccgaggcgggtcgc
gccaacgacggccccttcgctctcgtactgacccccacccgtgagcttgcaatccaggtc
gccgaggcgttcacctcctatgcgacgaacctcgacgacttctccgtcctcccgatctac
ggcggccaggcctacggcccgcagctgtccgggctcaagcgcggcgctcaggtcgtcgtg
ggaacgcccggtcgtgtcatcgaccacctcaagaagggctccctcaagctcggcagcctc
cgtcacctcatcctcgatgaggccgacgagatgctcaagatgggcttcgccgaagacatc
gaagagatcttcagccagtccggtgactcacgtcaggtggctctgttctccgccaccatg
ccgacctcgatccaccgcctgaccggcaagtacctcaacaaccccaaagaggtgcgggtc
gcgtcgaagtcgcagaccggatcgaacatccgccagcgctaccacatggtccagcactcc
cataagctcgacgccctgacccggatcctcgaggtcgaggagtacgagggcatcatcatg
ttcgtccgcaccaagcaggccacggaggagctcgcggagaagctgcgtgcccgcggcttc
aaggcctcggcaatcaacggcgacattccccagcaggcacgtgagcgcacgatcgacatg
ctgcgcaacggcaaggtcgacatcctcgtcgccaccgacgtcgcagcccgcggcctcgac
gtcgagcgcatcaccctggtcgtcaacttcgacattcctcacgacaccgagtcctacgtc
caccgcatcggccgcaccggccgcgccggacgctccggtgaggccattctcttcgtcacc
ccgcgtgagcagcgtctgctcggctccatcgagcgcgcaacgaagcagaaggtcgaacag
ctgaagatgcccagcgtcgaagagctgacgaacacccgtgtggagaagttcaccaagcgc
atcgacgatgtgctcgccacgaccgaactgaccgagctcgcgaccgtcatcgaacagtac
gagctctcccgcaacgtgcctgcgaccgacatcgccgcagcgctggcgtctctggtgctc
gagtcgaacaccctcaaggccgatcccatgccggagccttcgcgcggcaagccaggtcgt
gaccgcgacagcggcggacgcgacggcaagcccggccgtgaacgctcatcccgtccgcgt
gatgagaacatgaccacctaccgtctggccatcggacgcaatgagcgtctgcagcccggt
gcggtcgtcggcgccatcgccaacgagggtggtctcacctcgaaggagatcggccacatc
gacatccggtcgaaccacacccttgtcgatctgcccaaggatctcgattcttcggtcatg
cgcaagctctccaacacccagatccagggtcgcccgatcgacatccgtccggattcgggc
cgtccggctcgtccgttcaagaagcgcaacttcgacaagcagcccggcgacagccgcaac
ttccgcaatgatcgccgcggaggcgccaagaagttcagcaatgaccgcttcggcggcgaa
cgctcacacgaccgctactga
DBGET
integrated database retrieval system
