Brevibacterium aurantiacum: BLSMQ_3718
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Entry
BLSMQ_3718 CDS
T04775
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
blin
Brevibacterium aurantiacum
Pathway
blin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLSMQ_3718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blin03019
]
BLSMQ_3718
03400 DNA repair and recombination proteins [BR:
blin03400
]
BLSMQ_3718
Enzymes [BR:
blin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BLSMQ_3718
Messenger RNA biogenesis [BR:
blin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BLSMQ_3718
DNA repair and recombination proteins [BR:
blin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BLSMQ_3718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
AOP55416
UniProt:
A0A1D7W8R0
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All DBs
Position
4049465..4051300
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AA seq
611 aa
AA seq
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MTSAPTTSPLDVLHDVFGYDEFRGQQQAVVDQIVGGGDAVVLMPTGGGKSLCYQIPSLVR
PGTGVVISPLIALMADQVAALENLGVRAAYLNSTLDFEEAQNVERALLAGELDLLYLAPE
RLVLPRTMSLLERAQVALFAIDEAHCVSQWGHDFRSDYLGLGVLAERFPDVPRIALTATA
TPATHAELTDRLHLGEAQHFVASFDRPNITYRIEPKQSGRSQLISFITTEHPGDSGIVYC
LSRRGVEQLADALVARGINALPYHAGLPSEVRAEHQARFLREDGLVMVATIAFGMGIDKP
DVRFVAHLDLPRSVEGYYQETGRAGRDGLPADAWMVYGLGDVVSQRRLIESGDGDRTYQR
RAMSHLDSMLALCETVDCRRVQLLRYFDEESEPCGNCDTCITPPVTWDATVAVQKLLSAV
IRLDRERGQKFGSGQVIDVLRGNDNERSRSADHESLSVWGVGSDLSETQWKTVVRQVLAR
GLLESHGDYGVLVVGEAAGPVLRSEVEISLRVDPVKKSGSKKAAAKRRGGPEVELGTADT
ALFEALRAWRAEQAKEQGVPAYVVFPDATLYGIVEAKPSTIGELGQVSGVGLKKLDRYGP
GVLEVLESSAA
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacttcggctcccacaacctctccgctcgacgtcctccatgatgtcttcggctatgac
gaattccggggccagcagcaagcggtcgtcgatcagatcgtcggtggtggagacgcggtc
gtcctcatgcccaccggtggaggaaagtccctctgctatcagattccaagtctcgtcagg
cccgggacaggcgtcgtcatctcaccactcatcgcgctcatggccgatcaggtcgccgca
ctggagaatctgggtgtcagggcggcatacctcaactcgacactcgacttcgaggaggcg
cagaacgtcgaacgcgcactcctggccggcgagctggatctgctctacctggcaccggag
cgcctagtcctgccgcgcacaatgtctctgctcgaacgagcccaggtcgcactgttcgcg
atcgatgaggctcactgcgtatctcagtggggccatgatttccgcagcgactacctcggc
ctgggagtgctggccgaacgcttccccgatgtgccgcgcattgcgttgactgccacggcc
acacctgccacccacgcagagctcactgatcgtcttcacctcggcgaggcccagcatttc
gtcgccagcttcgaccggcccaacatcacctaccgcatcgaaccgaagcaatccggtcgc
tcccagctcatcagcttcatcaccacagaacaccccggcgactccggcatcgtctactgc
ctgtcccgccgcggtgtcgaacagctcgccgacgctctcgtggcccgggggatcaacgct
ctgccctatcacgcgggcctgccctctgaagtgcgtgccgagcaccaggcacggttcctc
cgcgaggacggtctggtcatggtcgcgacgatcgccttcggcatgggcatcgacaaaccc
gatgtccgcttcgtcgcccacctcgacctgccgcgcagtgtggagggctactaccaggag
accggccgtgccggacgtgacggactgcccgctgacgcgtggatggtctacggcctcggc
gatgtcgtctcccaacgtcgcctcatcgaatccggagacggcgatcgaacctaccaacgc
cgagcgatgtcgcaccttgattcgatgctggctctgtgcgaaaccgtcgactgccgacgc
gtgcagctcctgcgctacttcgatgaggaatccgaaccctgcggcaactgcgacacctgc
atcactcccccggtgacctgggacgcaacagtggccgtgcagaaactgctgtcggcagtc
atccgcctcgaccgagaacgcggccagaaattcggctctggacaggtcatcgatgtgctg
cgcggcaacgacaatgagcggtcccgctccgccgaccatgagagcctcagtgtttggggc
gtcggcagcgatctcagtgaaacccaatggaagaccgtggttcgccaggttcttgcccgc
ggtctgctcgaatcgcatggcgactacggtgtcctcgtcgtcggcgaggccgccggaccc
gtcctgcgcagcgaggtcgagatctcactgcgcgtggatcccgtgaagaaatccggatcg
aagaaggcagcggccaagcgccgaggtggccccgaggtcgaactcggcaccgcagacaca
gccctgttcgaggctctgcgtgcttggcgtgccgagcaggcgaaggaacaaggggtcccc
gcctatgtcgtgttccccgatgccaccttgtacggaatcgtcgaggccaaaccgagcacc
atcggcgagctgggccaggtcagtggcgtgggtctgaagaagctcgaccgctatggtccc
ggcgtcctcgaggtccttgagtccagcgccgcctga
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