Blautia liquoris: INP51_15500
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Entry
INP51_15500 CDS
T07726
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bliq
Blautia liquoris
Pathway
bliq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bliq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
INP51_15500 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bliq03400
]
INP51_15500 (mfd)
Enzymes [BR:
bliq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
INP51_15500 (mfd)
DNA repair and recombination proteins [BR:
bliq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
INP51_15500 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
TRCF
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
RecG_dom3_C
AAA_22
MFD_D3
Motif
Other DBs
NCBI-ProteinID:
QOV19322
UniProt:
A0A7M2RIZ2
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All DBs
Position
complement(3400218..3403568)
Genome browser
AA seq
1116 aa
AA seq
DB search
MKALMQPLEDVAGFSELKQSLKKSRGLFVISGCLESQKPHMIAGLSDDVPCRLIVAENDL
KARELYEDYQLYDPDTLIYPAKDLIFYQSDVQGNLLTRQRMLAVKAILERKEVTIITSTG
GCMDYLLPLRILKKHILHLKNDSTVDLARFEKELAKIGYERCAQVEGPGQFSVRGGIIDI
FPLTEDDPYRIELWGDEIDSIRSFDAESQRSIENLDAITIYPAAEMLLNADDPKKDMVDT
FFDYLPDGSVIFIDEPNRILESAKALSDEFCEAMKQRMEKGLVTAKEIPELHTPEQLAYE
LNRRNSVALSLMEPRKQDWEIRGTFAVTVKSVNAYNNQFPLLVKDLAAWKKSGYRMILLS
PSKSRAGRLADEIQNEGIPAFFSEDENRILNAGEVMVIHGNARKGFEFPLQKFVLITETD
IFGKEIRKHRKKKQYNGKSIQNFSELSVGDYVVHENHGLGIYCGIEKVEVDHIIKDYMKI
EYSGGSYLYIQATQLDALQKYAGSGVRAPRLNKLGGQEWNKTKSKVRGAVKDIAKDLVAL
YAVRQETNGYAFSGDSIWQREFEEMFPFEETEDQLTAIDAVKQDMESSKIMDRLICGDVG
YGKTEIAIRAAFKAVQDSKQVVFLVPTTILAQQHYNTFTQRMKDFPVRVDLLCRFRTPAE
QRRTLQDLKKGQVDILIGTHRVLSKDIKFKNLGLLIVDEEQRFGVTHKEKIKNLKKDVDV
LTLTATPIPRTLHMSLIGIRDMSVLEEPPLDRVPIQTYVMEFNEEMVREAISREMARGGQ
VYYVYNRVNDIVEVTNRIAALVPEANVGFAHGQMKERELEKIMYGFINGEIDVLVTTTII
ETGLDISNVNTMIIQDADKMGLSQLYQLRGRVGRSNRTAYAFLMYKRDKMLKEVAEKRLH
AIREFTELGSGFKIAMRDLEIRGAGNLLGAEQHGHMEAVGYDLYCKMLSEAVKEAKGIPQ
QEDFETTVDVELDAYIPVTYITNEYQKLDIYKRIAGIENDEEYEEMLEELVDRFGDPPKS
VLNLLAVARLKAMAHQADIVEIKQMGNAVKLTMHERARLNPQMIPNILKEFQGQLTFKIG
SRPYFLLEPALKKNREKEFALNESQNVVKILKKCCS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcattgatgcagcctctggaagacgttgcgggcttttcggagctgaaacagagt
ttgaaaaaatcccggggtctttttgtcataagcggctgtctggaatcacagaagccacat
atgattgcgggattgtcagacgatgtgccttgtcgcctgattgtagcggaaaacgatctg
aaggccagagaattatatgaggattatcagctgtatgatccggacaccctgatttatccg
gctaaagatctgatcttttatcagtcggacgttcagggaaatcttttgacaagacagaga
atgctggctgtcaaggcaatacttgagcggaaggaagttaccatcattaccagtacaggg
ggatgtatggactaccttctgcctcttcgcatactcaaaaaacatatccttcatctgaag
aatgattcaaccgtggatcttgccagatttgaaaaagaacttgccaagattgggtacgaa
aggtgtgcacaggtggaagggccgggtcagttttcagttcgcgggggaattatcgatatt
tttccattgacggaggatgacccgtatcggatcgaactctggggtgacgaaattgattcc
attcgaagttttgatgcggaaagtcagcgttctattgaaaatctggatgcaatcacgatc
tatcctgccgcggagatgcttttgaatgctgacgatccaaaaaaagacatggtggatacg
ttttttgattatctgccagatggatctgtgatatttattgatgagccaaaccggattctc
gagagtgcaaaggcactatccgatgaattctgtgaggcgatgaaacagagaatggaaaaa
gggctggtgacggcaaaggaaatacctgaacttcacacgccggaacaacttgcatatgag
ctgaatcgcagaaacagtgtggctttaagcctgatggaacccagaaaacaagattgggaa
atcaggggcacctttgctgtcacggtgaaatcggtcaatgcatacaataaccagtttcca
cttttagtaaaagatctggccgcttggaaaaagtccggatatcgtatgattctcttatcc
ccatccaaatcacgtgcaggaagacttgcagatgagatacaaaatgaaggaattccggca
tttttcagcgaagatgagaaccggattctaaatgccggagaagttatggtgatccatgga
aatgcccgaaagggatttgaatttccgctgcagaagtttgtattgatcaccgaaacggac
atattcggaaaagaaatcaggaagcatagaaagaagaaacagtataacgggaaaagtatt
cagaacttttcagagctttctgtaggtgattatgtagttcacgagaaccatgggcttgga
atttattgcggaattgaaaaagttgaagtcgatcatatcatcaaagattatatgaagatc
gagtattccggcggaagttatctgtacattcaggcaactcagttagatgcactacagaag
tatgccggttctggggtaagggcacccagactgaacaagcttggcgggcaggaatggaat
aaaacaaagagcaaggttcgcggggccgtaaaagatattgcaaaagatctggttgctctg
tatgcggtccgtcaggagacaaatgggtatgctttcagcggagacagtatctggcagagg
gaattcgaagagatgtttccttttgaagagactgaggaccagttgactgcaattgatgca
gtcaagcaggatatggagagcagcaaaatcatggatcgtctgatttgcggagatgtgggc
tatgggaagacagagatcgcaataagagcggcgtttaaggcggtacaagacagtaaacag
gttgtattccttgttccgactacaattcttgcacaacagcactacaatacatttacccag
agaatgaaggatttcccggttcgggttgacttgttgtgcaggtttcgcacaccggcagag
cagagaaggacacttcaggatctgaaaaagggccaggttgatattctgatcggcacacac
agggtactgtcgaaagatatcaagtttaagaatttgggccttctgattgttgacgaggaa
cagcgtttcggtgtaacccataaggaaaaaatcaagaatctgaaaaaagacgtggatgtt
ttgacactgacagcaacgccaatcccaaggacgctgcatatgagcctgatcgggatccgc
gacatgagtgtgcttgaggagcccccacttgatcgggttcctatacagacctacgtgatg
gagtttaatgaagagatggttcgcgaagcaatcagccgtgagatggctcgcggcggacaa
gtttactatgtttataaccgtgtaaatgatatcgtagaggtgacgaatcgcattgctgcg
ctggtgccggaggcaaatgttgggttcgctcacggacagatgaaagaacgtgaactggaa
aagatcatgtatggatttatcaacggtgaaattgatgtcttggtgactactactattatc
gaaacaggacttgatatttccaacgtaaatacgatgattatacaggatgcagataagatg
gggctttcccagctttatcagctccgcggtcgtgtggggcgttccaaccgtacagcatat
gcgttcctcatgtataagagagacaagatgctaaaagaagtagctgagaaaagacttcac
gcaatccgtgaatttacagaacttggaagcggattcaagattgccatgcgagatcttgag
attcggggtgccgggaatcttctgggtgccgaacagcatgggcatatggaggcagtagga
tatgatctttactgtaagatgctcagtgaggctgtaaaagaagccaaaggaattcctcag
caggaagattttgagacaacggtagatgtggaactcgatgcatatattcctgttacctac
attacgaacgaatatcagaaattagatatttataagcggattgccggtattgaaaatgat
gaagaatatgaggaaatgctggaagagctggttgaccggtttggagacccgccaaagtca
gtactgaaccttctggcagtagcgagactcaaagcgatggctcatcaggctgatattgtg
gaaatcaaacaaatgggtaatgcggtgaaactgacaatgcacgaaagagcacgtctgaat
ccgcagatgatccccaatatactaaaagaattccaagggcagttaacatttaaaatcgga
agcagaccatattttttgctggagcctgcccttaaaaaaaacagagaaaaagaatttgcc
ttgaatgagagccaaaatgttgtaaaaatcttaaaaaaatgttgctcttaa
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