Bifidobacterium longum DJO10A: BLD_0145
Help
Entry
BLD_0145 CDS
T00707
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj03030
DNA replication
blj03430
Mismatch repair
blj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLD_0145 (dnaE)
03430 Mismatch repair
BLD_0145 (dnaE)
03440 Homologous recombination
BLD_0145 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blj03032
]
BLD_0145 (dnaE)
03400 DNA repair and recombination proteins [BR:
blj03400
]
BLD_0145 (dnaE)
Enzymes [BR:
blj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLD_0145 (dnaE)
DNA replication proteins [BR:
blj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLD_0145 (dnaE)
DNA repair and recombination proteins [BR:
blj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLD_0145 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
tRNA_anti_2
DUF655
DUF5487
Motif
Other DBs
NCBI-ProteinID:
ACD97591
UniProt:
B3DQ92
LinkDB
All DBs
Position
170175..173732
Genome browser
AA seq
1185 aa
AA seq
DB search
MADYGNNFVQLHNHTHYSLLDGASKIPDLAKRAAELGMPAVGITDHGNMHGAYEMYTNCV
ANGVKPIIGIEAYVTPETARQDKSRVHWGTEAQRRDDVSGGGLITHLTMWAENDEGLVNL
IKASSVANLEGRVMRYPRMDKEVLATYSKGVIASSGCPSGIIQTRLRLGQFDEALRAAGE
FQDIFGKDNFFIELMDHGLTIETQVTNDLLTIAKKLDAPLLATNDSHYVHAEDAQAQDAM
LCINSGSRLDDPDRFKFDGTGYYIKTAEEMRELFKDHPDACDNTLVIAERCNVMFDDHED
GAFMPKFPCPEGWDETSLFLKKVEEGLEKRYDGNPPLDVLKQADYECGVICQMQFCGYFL
VVADYIQWAKDHGIMVGPGRGSAAGAMVAYSMGITELDPLKHGLIFERFLNPERVSLPDI
DVDFDPEGRARVIEYCGEKYGTDKVAQCVIYGTIKTKQALKDSARIMGYEFSVGEKITKA
LPPAATGGKDISLHDIFDPAAKRYAEAREFRELYDSDPDTKRITEEAKGIEGLIRQTGVH
ACATIMGSAPITDTSPLLERTDGTITTTFEYHTCETLGLVKMDFLGLSNLTIIHDTLKNI
EANGKPAIDYTKIPLDDAETYKLMSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDISALIA
LYRPGPMSMDSHTNYAKRKNGLQKITPIHPELEEPLKQVLDETYGLIIYQEQVQSAARIL
AGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEASQAVWDILVPFSGYAFN
KAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKDKTALYLGEARRMGIQVLSPDVN
ESVYEYSAVGDVVRFGLGAIRNVGDKAVADIIAEREGPRGKFVNFMDFIRRVPLTALNRR
LVESLIKAGAFDSIDPNRRALLTVHEAAIDSVVSLKRKQAEGQFDLFSDAEDGGAEAMGD
ASVTVPDLEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILASLREMSIAHLVDRAKTMGE
GQQVTLAGLVTNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAAAAELAVDAIVQI
RGQVELRDETVSLRATEMRIPTLEAEDERPLVITLPPVALERQRMMQLGQVLANHPGYCE
VHLAVLDEKGNAQVLTFGDRFRVKRDTSLFAEIKILFGPSCLPAA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacgggaacaactttgtgcaactgcataaccacacgcactattcgctgctc
gatggtgcgtcgaagattccggatttggccaaacgcgccgccgaacttggcatgcctgcg
gtcggcatcaccgaccatggcaacatgcatggcgcctacgagatgtacaccaactgcgtg
gccaatggcgtcaagcccatcatcggcatcgaagcttacgtgaccccggaaaccgcgcgt
caagacaagtcccgtgtgcactggggcaccgaagcccagcgccgcgacgacgtctccggt
ggtggtcttatcacccacttgaccatgtgggccgaaaacgacgaaggcctggtcaacctc
atcaaagcctcgtccgtggccaacctcgaaggtcgcgtcatgcgctacccgcgtatggat
aaggaggtgctcgccacctattccaaaggtgtgatcgcctcctccggatgcccttcgggc
atcatccagactcgtctgcgcctcggtcaattcgatgaggccctgcgcgccgccggcgaa
ttccaggacatcttcggcaaagacaacttcttcatcgaactcatggatcacggtctgaca
atcgagacccaggtcaccaacgacctgctgaccattgccaagaagctggacgccccgctg
ctggccaccaacgattcccactacgtacacgccgaagatgcacaggcgcaggacgccatg
ctctgcatcaactccggttcccgtcttgacgatccggaccgattcaagttcgacggcacc
ggctactacatcaaaaccgccgaagagatgcgcgaactgttcaaggaccacccggacgcc
tgcgacaatacgctcgttatcgccgagcgctgcaacgtgatgttcgacgaccacgaagac
ggcgcgttcatgccgaaattcccttgccccgaaggctgggatgagacctccctgttcctc
aaaaaagtcgaggaaggtctggagaagcgttacgacggcaacccgccgctcgacgtattg
aagcaggccgactacgaatgcggcgtgatctgccagatgcagttctgcggatacttcctc
gtggtcgccgactacattcagtgggccaaggaccacggcattatggtgggtccgggccgt
ggttcggccgcaggcgccatggtcgcctattccatgggcattaccgagctcgatccgctc
aagcatggcctgattttcgagaggttcctgaaccctgagcgagtgagccttcctgatatc
gatgtcgacttcgaccctgaaggtcgtgcgcgagtcatcgaatactgcggcgaaaaatac
ggcaccgataaggtcgcccagtgcgtgatctatggcaccatcaaaaccaagcaggccctg
aaagactccgcccgcatcatgggttatgaattctcagtcggtgaaaaaatcaccaaggcg
ctgcctccggcggccaccggcggcaaagacatcagcctgcatgacatcttcgacccggcc
gccaaacgttatgccgaggccagggaattccgagaactctacgattccgacccggacacc
aagcgcatcaccgaggaagccaagggtatcgaaggcctgattcgacagaccggtgtacat
gcctgcgccaccatcatgggtagcgcacccatcaccgacacctcgccgttgctggaacgc
accgatggcaccatcaccaccaccttcgaataccacacgtgcgaaacgttggggctggtc
aagatggacttccttggcctgtccaacttgacgatcatccacgacaccctgaagaacatc
gaggccaacggcaaacccgccatcgactacaccaagattccgctcgatgacgccgaaacc
tacaaactcatgtcccgaggagacacgctcggcgtgttccagctcgattccgacggcatg
cgttcactgctgaaaaccctgaagcccgataacttcaacgatatttccgcacttatcgcc
ctgtaccgaccgggcccgatgagtatggattcgcacaccaactacgccaagcgcaagaac
ggcctgcagaagatcacgccaattcaccctgagcttgaggagcctctgaagcaggtgctt
gacgagacctatggtctgatcatctaccaggagcaggtgcagtccgccgcccgaatcctc
gccggttattcactgggcaaggcagacgtgctgcgtcgagccatgggtaagaagaagccc
gaagtgctggccaaggagaaggtgccgttcttcgccggtatgaaggagcatggatactcc
gaagaggcctcccaggccgtgtgggatattctggtgccgttctccggctacgctttcaac
aaagcgcactccgccgcatacggtctgatctcctactggaccgcatatctgaagacgcac
tacccggtcgaattcatggccgccctgttgcaaggtgccgccaccaacaaagacaagacc
gcactgtacttgggcgaggcccgccgcatgggcatccaggtgctctcgccggacgtcaac
gaatcggtgtacgagtactcggcagtcggcgacgtcgtccgattcggtcttggtgccatc
cgtaacgtgggtgacaaggccgtggccgatatcatcgccgaacgcgaaggcccgcgcggc
aagttcgtgaacttcatggacttcatccgccgcgtgcccctgaccgcgctgaaccggcga
ttggtcgaatcgttgatcaaggccggtgccttcgactcgattgacccgaaccgtcgcgcg
ctgctcaccgtgcacgaggccgccatcgattcggtggtgagtctgaagcgcaaacaggcg
gagggccagttcgatttgttctccgatgccgaggatgggggagcggaggccatgggcgac
gcttccgtgaccgtacccgatcttgaggaatgggacaagaagaccaaacttaacttcgaa
cgcgaaatgttgggcctgtatgtgtctgaccatccgctctccggtatgcagtcgattctc
gcgtccttgcgtgaaatgtccatcgcgcatctggttgatcgagccaaaacgatgggtgaa
ggacagcaggtcacgttggctggtttggtcaccaatgtggaccggcgcgtatccaagaag
ggcaacccctgggccatcgtgaccatcgaagacatggaaagctccatccaatgcatgttc
ttcggcaaggtctatgaagcggccgccgccgaacttgccgtggacgccatcgtacagatt
cgtggccaagtggagttgcgcgacgaaaccgtttctctgagagccacggaaatgcggatt
ccgaccttggaagccgaggatgaacgtccgttggtcatcacgctgccgccggtggcgttg
gagcgccaacgcatgatgcaactcggtcaggtgctcgctaatcatcctggttactgcgaa
gtacatcttgcggtgctggatgagaagggtaacgctcaggtgctcacgtttggcgatcgt
ttccgcgtcaagcgagatacttcgttgtttgctgagatcaagattctgtttggccccagc
tgcttgcctgccgcctga
DBGET
integrated database retrieval system
