Bifidobacterium longum DJO10A: BLD_0950
Help
Entry
BLD_0950 CDS
T00707
Name
(GenBank) Putative metallo-beta-lactamase superfamily hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLD_0950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blj03019
]
BLD_0950
Messenger RNA biogenesis [BR:
blj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BLD_0950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
DUF459
Motif
Other DBs
NCBI-ProteinID:
ACD98396
UniProt:
B3DTC7
LinkDB
All DBs
Position
complement(1094491..1096341)
Genome browser
AA seq
616 aa
AA seq
DB search
MAQEQKKTSKNTNSRRRGSARGRNANGSNSRTPSRKINATRQATAPQQDAVLIAPPKYRK
GSMRITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPDFSYIKNRLDK
VDALVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVDAKCKEHHQNPTKVEVAGREK
LKVGPFDLEFVNVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKIGE
KGVDLLMMDSTNAEVPGFVKPETSIGPALDQAFAQATRKIIVASFSSHVHRVQQVVDAAH
KYGRKVVFVGRSMVRNMSIAADLGYLHIPEGTVVDLKQANDIQDDKLVFMCTGSQGEPMA
ALGRIADGNHRDIHINEFDTVILASSLIPGNEHGVYKVINKLVQLGAKVVNRDNAAVHVS
GHCNEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPQNVVLAEDGDVVDLYH
GRAAVVGSVPCGYVYVDGDSVGELTDDELEKRRILGTEGFVSAFVVVDTDNHEVVTGPKI
YLNAVAEDESEFDKVRHQIVEQLNDQMMQGTRDTYKLQQTMRRTLGSWVARQLHRKPMIV
PVVADIAQDVETVETK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcacaagaacaaaagaaaacaagcaagaacacgaattctcgccgtcgcggttccgcg
cgcggccgcaacgccaacggatccaacagccgtacgccgtcccgtaagatcaacgccacc
cggcaggccaccgcaccccagcaggatgccgtgctgatcgccccgccgaagtaccgcaag
ggctccatgcgcatcacgccgctcggcggcttgggtgaaatcggccgcaacatgaacgtg
atcgaatacaacggtcacctgctgctcatcgactgcggcgtgctcttccccgaggaggag
cagccgggcgtggatctcatcctgcccgatttcagctacatcaagaaccgtctcgacaag
gtcgacgccctggtgctcacccacggccacgaggaccacatcggcggcgtgccctacctg
ctcaagctgcgcccggacatcccgctgatcggctccaagctgaccctcgccttcgtggac
gccaagtgcaaggaacaccaccagaaccccaccaaggttgaggttgccggccgtgagaag
ctcaaggtgggtcccttcgacctcgaattcgtcaacgtcacccactccatcccggacgcc
ctggccgtctatgtcaagaccccggccggctccctgatcgacacgggcgatatcaagctc
gaccagctgccgctcgaccaccgcatcaccgacctcgtcgaattcggcaagatcggcgaa
aagggcgtggacctgctgatgatggactccaccaacgccgaggtgcccggcttcgtcaag
cccgagacctccatcggcccggcccttgaccaagcgttcgcccaggccacccgcaaaatc
atcgtcgccagcttctcctcccacgtgcaccgtgtgcagcaggtggtggacgccgcccac
aagtacggccgcaaggtcgtgttcgtcggccgttcgatggtgcgcaacatgtccatcgcc
gccgacctcggctacctgcacatccccgaaggcaccgtcgtggacctgaagcaggccaac
gacattcaggacgacaagctcgtcttcatgtgcaccggctcccagggcgaaccgatggcc
gcactcggccgcatcgccgacggcaaccaccgcgatatccacatcaacgagttcgacacc
gtgattctcgccagctccctgattccaggcaatgagcacggcgtctacaaggtgatcaac
aagctcgtgcagctcggcgccaaggtcgtcaaccgcgacaacgccgccgtgcacgtgtcc
ggccactgcaacgagggcgagctgctgtacatgtacaacatcgtcaagcccaagtgcgcc
atgccgatccacggcgaaaaccgccatctggtggccaacggcctgatcgccgtcaagacc
ggcgtggacccgcagaacgtggttttggccgaagacggcgatgtggtcgacctgtaccac
ggcagggccgcggtcgtcggctccgtgccgtgtggttacgtgtacgtcgatggcgattcc
gtcggcgagctgaccgatgacgagctggaaaagcgccgcattctcggcaccgagggcttc
gtctccgcgttcgtggtggtcgacaccgacaatcacgaggtcgtcaccggcccgaagatc
tacctgaatgccgtggccgaggacgaaagcgagttcgacaaggttcgtcaccagatcgtc
gaacagctcaacgaccagatgatgcagggcacgcgcgacacctacaagctgcagcagacc
atgcgccgcacgctcggcagctgggttgcgcgccagctgcaccgcaagccgatgatcgtg
cccgtcgtggccgacatcgcccaggacgtcgaaaccgtagaaaccaagtag
DBGET
integrated database retrieval system
