Bifidobacterium longum DJO10A: BLD_1289
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Entry
BLD_1289 CDS
T00707
Symbol
dnaX2
Name
(GenBank) DNA polymerase III gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj03030
DNA replication
blj03430
Mismatch repair
blj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLD_1289 (dnaX2)
03430 Mismatch repair
BLD_1289 (dnaX2)
03440 Homologous recombination
BLD_1289 (dnaX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blj03032
]
BLD_1289 (dnaX2)
03400 DNA repair and recombination proteins [BR:
blj03400
]
BLD_1289 (dnaX2)
Enzymes [BR:
blj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLD_1289 (dnaX2)
DNA replication proteins [BR:
blj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLD_1289 (dnaX2)
DNA repair and recombination proteins [BR:
blj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLD_1289 (dnaX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ACD98734
UniProt:
B3DUB5
LinkDB
All DBs
Position
complement(1488331..1491213)
Genome browser
AA seq
960 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGKLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICDKEGIKPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAVDAVIDHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDRAESVLSDTAEAEDMDDLHRQAKALGLGALTAMADIINTTLGAMTGAISPRMRLELLA
ARLLAGSESGFATAAPAPASSGMPPAAASSTSTTSAASGTGASGFAGASRGGFAGASHGG
FSGAARNQQAAAPQSTASHESVGGNGPVSDRPADSPSVQPAVATAAAGAGWGAPAASPAV
PAQPVASPAASDNRSIDEKWDAAVAALPETIREYVSRDKVPTVKFGPNRKGLPCLSMTFD
KSLSQHAFALAVDNSGKKAAAVVMDAVRNEFGANAVIAPSAVAANGERVESVKRMSPEQL
AKVKQQIAMAKAGLAASSLGAGLGIHMGSEPKAPKPTETGRAEDTDDSHRAGQSSASTAA
KNWSDDDPWAKPAVSNASPQSADGFAPNEPVATPAPEEHHKKHVAVPDISDGVDPWAAPA
APVAPTASVASAGPTGQSTGQPAAASSATAVAGESDDPWNQTQSQAAVSPASQPAEADPW
NQPYQQSPHDDPWNQPQGNHAQAAPQPGDDPWNQPQSQTPASSVPQTVSGNMSGDDPWNQ
PQSVPQPAAGDDPWNQPQAVPQSAPQATPHGDPWNQPQPAQPTPNADPWNSQPQPQPKPQ
PQVAAEDDEYSMSDQSLGEATAMNLDDLKKLFEVKKVEQFAADDPKNPKNIQPAKKHSDE
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtcgctatcgtccggacaccttcgaaggggtcatcggccag
gaccaagtcacggtcccgctgatgcgcgccttggacgagggcaagctcacacatgcctat
ctgttctcagggccgcgaggctgcggcaaaaccagctccgcgcgtatcctggcccgttgc
gtcaactgtgccaaagggccgacttcccacccctgcggcgaatgcgaaagctgcaaggac
ctggccaccggcggtccgggttccatcgacgtggtcgaaatcgatgcggcctcgcacaac
ggtgtggatgatgctcgagaattgcgagaacgcgctgggttcgcccctgcgcgcgaccgc
tataagattttcattctcgatgaggcccacatggtcacgcagcagggcttcaatgcgctg
cttaaaatcgttgaagagccgcctgaacatgtgatgttcatcttcgccaccaccgaacca
gacaaggtgatcggcaccatccgttcgcgcacccaccactatccgttccgtctggtgccg
caggaagtcatgggtccctacctggagacgatctgcgacaaggaaggcatcaagcccgag
cccggtgtgctgaaactggcgatgcgcgccggtggcggctccatgcgagataccctgtcc
gtgcttgaccagctgatggttggttcggtcgaaggcgttatcacccatgatgccgctgta
gccctgctcggcttcacgccggaggcactgatcggcgaggccgtggatgcggtaatcgat
cacaacggcgaagccctgtacggcgttatccagaaagtcgtggtcggcggattcgatccg
agacgattcgtcgaagacctactggctcgtgtgcgtgatctgctggtgcttacgttggcc
ggggaccgtgcggaatccgtgctgtccgacacggctgaggccgaggatatggacgatctg
caccgccaagccaaggcgctgggactgggcgcactgaccgcaatggcagacatcatcaac
actacgttgggtgccatgaccggagccatttctccgcgtatgcgcttggaactgctggcc
gcgcgattgttggccggcagtgaatcaggctttgcaacagccgctcccgcgccagcttct
tctggtatgccgcctgcggctgcttcttcgacttcgactacgtcagccgcttccggtacg
ggtgccagtggttttgccggcgcatcgcggggcgggtttgccggagcctcacatggcgga
ttctccggtgctgcacgcaaccagcaagcagccgcgcctcagagcaccgcttcccatgaa
tctgttggaggcaacggcccggtcagcgaccgacctgcggactctccgtctgtgcaacct
gctgtagcaactgctgctgccggtgccgggtggggcgctcccgccgcgtcgccggccgtc
ccggctcaaccggtggcctcgcctgcggcatcggataatcggtccatcgacgagaagtgg
gatgcagccgtcgccgctttgccggaaaccattcgtgaatatgtgtcacgagacaaggtg
ccgaccgtaaaattcggccccaaccgtaagggtctgccttgcctgtcgatgacgttcgac
aagtcgctgagccagcacgctttcgccttggccgtggataacagcggtaagaaggcggcg
gccgtggtgatggatgccgtgcgcaacgagttcggcgccaatgcggttattgcaccttct
gcggtcgcggcgaatggcgagcgagtcgaatccgtcaaacgtatgagcccggagcaattg
gccaaggtcaagcagcagattgccatggccaaggctggattggccgcgtcgagtttgggc
gcgggcctgggcattcatatggggagcgagccgaaagctccgaagccgactgaaacaggc
cgagccgaggatacggatgacagccatcgagccggccaatccagtgcatccacggcggcg
aagaactggagtgacgatgacccttgggccaagccggccgtaagcaacgcttcgccgcaa
tctgcagacgggttcgcacctaacgagcccgttgctacgcctgcgcccgaagagcatcac
aagaagcatgttgcggttccggacatcagtgacggtgttgatccgtgggccgctccggct
gctcctgttgcacccactgcgtccgttgcgtccgctggacccactggacagtccactggg
cagccagccgccgcatcttctgctacggcagttgccggcgagagcgacgatccatggaat
cagacgcagtctcaggccgcggtctcaccggcgtcgcaaccggccgaagccgacccgtgg
aaccagccatatcagcagtctcctcacgatgatccgtggaatcagccgcaggggaaccat
gctcaggcggctccgcagccaggagacgacccgtggaatcagcctcagtcccagactccg
gcttcttcggttcctcagacagtgtcgggcaatatgtcgggcgatgacccgtggaaccag
ccccaatcggttccgcagccggctgccggcgatgacccgtggaatcaaccgcaggcagtt
ccacaatcggctccgcaggccaccccgcacggtgacccgtggaatcaaccgcaacccgca
cagccgaccccgaatgccgacccgtggaatagccagccccagccccagccgaaaccacaa
ccgcaagtcgcggccgaggatgacgaatactcgatgagcgaccagtcgctcggcgaggcg
acggccatgaatctcgacgatctgaaaaagctattcgaggtcaaaaaagtcgagcaattc
gcggcagatgatccgaagaaccccaagaacatccagcctgccaagaagcactcggatgaa
taa
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