Bifidobacterium longum DJO10A: BLD_1664
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Entry
BLD_1664 CDS
T00707
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
blj
Bifidobacterium longum DJO10A
Pathway
blj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLD_1664 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
blj03019
]
BLD_1664 (pnp)
03016 Transfer RNA biogenesis [BR:
blj03016
]
BLD_1664 (pnp)
Enzymes [BR:
blj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BLD_1664 (pnp)
Messenger RNA biogenesis [BR:
blj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLD_1664 (pnp)
Transfer RNA biogenesis [BR:
blj03016
]
Prokaryotic type
tRNA degradation factors
BLD_1664 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
PCB_OB
Mug135_C
Motif
Other DBs
NCBI-ProteinID:
ACD99109
UniProt:
B3DPX0
LinkDB
All DBs
Position
2003064..2005805
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AA seq
913 aa
AA seq
DB search
MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE
NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ
VVETVLAVNPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER
AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV
ICEAQDELKKIAAKETKEFQLFPEYTDELYARIDEIAHKDLDEALSIAEKLPRQDRIHEI
KEHVREVLADEFTDMDDAEKDKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA
EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE
TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS
LLAAGVPLKAPVAGIAMGLVSGDVDGKHIFKTLTDILGAEDAFGDMDFKVAGTSEFITAL
QLDTKLDGIPADILAAALQQAKEARATILEVINECIDGPAEMSEFAPRIITTSVPVEKIG
EVIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKAIIDQIANPHVPEAGET
YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVIVQGVD
DRGKISLAIPGFEDQENNARPSRGDRDDRRGGRGRGDRDDRRGGRGRRSERDDRDFDDRD
DRPRRRRSDDFEDDYDDRPRRRRSDDRDFDRDDRDDDRPRRRRSADRDFDDRDDRDARDS
RDDDRPRRRRSSDRDDRGDRDDRRGGSRGRGRGSDRNPRYATDDNYDDYRADREERTERP
RRRVRRDFDPFED
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgaaatcaaggccgttgaggccgtaatcgacaatggatcgtttggcaag
cgcacgctgcgcttcgagaccggccgcctcgcccagcaggccgatggcgctgtggccgcc
tacctcgacgacgattccatgattctgtccaccaccaccgccggttccagcccgaaggag
aactacgacttcttcccgctgaccgtcgatgttgaagagaagatgtacgctgccggcaag
attccgggctcgttcttccgccgtgaaggccgcccgagctccgaggccatcctcgcctgc
cgcatcatcgaccgcccgctgcgcccgctgttcccgcacaccctgcgcaacgaagtgcag
gtcgtcgagaccgtgctcgccgtgaaccctgatgacgcttacgatgtcatcgccctgaac
gccgcttccgcctccactatgatctccggcctgccgttcgaaggcccggtctccggtgtg
cgtctggcgctgattgatggccagtgggttgccttcccgcgttggagcgagcgtgagcgc
gccgtgttcgagattgtggtcgctggccgcgtgatcgagaacggtgatgttgccatcgcc
atgatcgaggccggtgccggcaagaacgcctggcacctcatctacgacgagggtcagacc
aagcccgatgaggaagtcgttgccggtggtcttgaggccgccaagccgttcatcaaggtg
atttgcgaggctcaggacgagctcaagaagatcgccgccaaggagaccaaggaattccag
ctcttcccggagtacaccgacgagctgtacgcccgcatcgacgagatcgctcacaaggat
ctggacgaggccctctccatcgccgagaagctgccgcgccaggaccgcatccacgagatc
aaggagcacgtgcgcgaggtgctcgcggacgagttcaccgatatggacgatgccgagaag
gacaaggaactcggtaacgccttcaaggaactgcagcgccagattgtgcgtcgccgcatc
ctgaccgaggactaccgcatcgacggccgtggcctgcgcgacatccgcaccctgtccgcc
gaggtggacattgtgcctcgcgtgcacggttccgccctgttccagcgtggcgagacccag
attctgggcgtcaccacgctgaacatgctcaagatggagcagcagatcgacgcgctgtcc
ggtccgcagtccaagcgttacatgcacaactacgagatgccgccgtactccactggtgag
accggccgcgtcggttccccgaagcgccgcgaaatcggccacggcgccctcgccgagaag
gctctcgtgccggtgctgccgagccgcgaagagttcccctacgccatccgacaggtctcc
gaggccatcggttccaacggttccacttcgatgggttccgtgtgcgcctccacgctgagc
cttttggctgccggcgtgccgctgaaggctccggttgccggcatcgccatgggcctcgtg
tccggcgacgttgatggcaagcacatcttcaagaccctcaccgatattctgggtgccgag
gatgccttcggcgacatggacttcaaggtggccggtacttccgagttcatcaccgccctg
cagctcgacaccaagctcgacggcatccccgccgacatcctggccgccgctctgcagcag
gccaaggaagcccgcgccacgattctcgaggtcatcaacgagtgcatcgacggcccggcc
gagatgagcgagttcgctccgcgcatcatcaccacctccgtcccggttgagaagatcggc
gaagtcatcggcccgaagggcaagatgatcaaccagattcaggaagacaccggcgctgaa
attgccatcgaggatgacggtaccgtcttcatctcctccgagggtggcgaggctgctgag
aaggccaaggccatcatcgaccagattgccaacccgcacgtgcccgaggccggcgaaacc
tacaacggcaaggtcgtcaagaccacgtcgttcggcgctttcgtgaacctcacccccggc
accgacggcctgctgcacatctcccagatccgcaacctggccaacggcgagcgtattgac
gctgtcgaagacgtgctcaaggaaggcgacaccgttgaggtgatcgttcagggtgtcgat
gatcgcggcaagatctccctggccattcctggtttcgaggatcaggagaacaacgcccgc
ccgagccgtggcgatcgcgatgaccgccgtggcggccgtggccgtggtgaccgtgacgat
cgccgtggcggccgtggccgtcgctccgagcgcgatgaccgtgacttcgacgatcgtgac
gaccgtccgcgtcgccgtcgctccgatgacttcgaggatgattacgacgaccgtccgcgt
cgccgtcgctccgatgaccgtgacttcgatcgcgatgatcgcgatgatgatcgtccgcgt
cgccgtcgttctgccgaccgtgacttcgacgatcgcgatgaccgtgatgctcgcgactcc
cgtgacgatgatcgtccgcgtcgccgtcgctcttccgatcgcgatgaccgtggcgatcgt
gatgaccgccgtggcggttcccgtggccgtggccgtggctcggaccgtaacccgcgctac
gccaccgacgacaactacgacgactaccgcgccgaccgcgaagagcgtactgagcgcccg
cgtcgccgcgtccgtcgcgactttgatccgttcgaggactaa
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