Bifidobacterium longum DJO10A: BLD_1917
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Entry
BLD_1917 CDS
T00707
Symbol
vsr
Name
(GenBank) Very short patch repair (Vsr) endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
blj
Bifidobacterium longum DJO10A
Brite
KEGG Orthology (KO) [BR:
blj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blj03400
]
BLD_1917 (vsr)
DNA repair and recombination proteins [BR:
blj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BLD_1917 (vsr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
PNP_phzG_C
Motif
Other DBs
NCBI-ProteinID:
ACD99362
UniProt:
B3DRI0
LinkDB
All DBs
Position
2282844..2283278
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AA seq
144 aa
AA seq
DB search
MEKYERGTRSYTMSHIRGKDTKIEVLVRSYLFRKGLRFRKNDKRYPGHPDVVLPKYHAIV
FVNGCFWHMHEGCSKHSMPKSNVEFWQAKLLRNHNRDIAQRAELEAAGWRVITVWECELT
KAVRDERLVRLYEQIVEGDADSAE
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
gtggagaagtatgagcggggtacccgttcgtacacgatgtcgcatattcgtggcaaagac
accaaaattgaggtactggtacgcagctacctgtttcgcaaggggttgcgattccgcaag
aacgacaagcgttaccccggacacccggatgtagtactgccgaaataccacgccatcgtg
tttgtcaacggctgtttctggcacatgcatgaaggatgttccaaacattcgatgccgaaa
tcgaacgtggaattctggcaggcgaaactactgcgcaatcacaatcgagacatcgcgcag
cgagccgaactggaggccgctggctggcgtgtaattaccgtatgggagtgcgaattaacg
aaagccgtgcgcgacgaacgcctcgtacggctgtatgagcagattgttgaaggagatgca
gattcagcggaataa
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