Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_00335
Help
Entry
BLNIAS_00335 CDS
T01845
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
blk
Bifidobacterium longum subsp. longum KACC 91563
Brite
KEGG Orthology (KO) [BR:
blk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blk03016
]
BLNIAS_00335 (truB)
Enzymes [BR:
blk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BLNIAS_00335 (truB)
Transfer RNA biogenesis [BR:
blk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BLNIAS_00335 (truB)
Prokaryotic type
BLNIAS_00335 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
SAMD1_SHD
Motif
Other DBs
NCBI-ProteinID:
AEI96795
LinkDB
All DBs
Position
282794..283957
Genome browser
AA seq
387 aa
AA seq
DB search
MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRL
LNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDGEARSRWQTLSAQLTEGGQSGEPTALP
TASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFT
VLDIRSGFVAGEQAAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGY
LTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLD
TPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIV
PQTHDVAAIIERANAHQAKPVTVFPLA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgcttcatacaacacccagcggtctgctcatcatcgacaagccgcaaggcgtgaccagc
ttcgacgccgtcgccgccgtgcgcggcgcgttgcacatcaagaaggtcggtcacgccggc
acccttgaccccatggccactggcacgctggtcatcgccttcggccacgccacacgactg
ctcaacgccatcgtggcgcatgacaaaacctacgaggccaccatacgcctcggcctgcgc
accactaccgacgatgccgaaggcgaggtgcttgtcgatggtgaagcccgttcccgctgg
caaacgctatcagcgcagctgactgagggtggccagagcggcgaaccaacggcgttacca
actgcctcatggcaagacctgctcacacgcaccatcgccaccaatttcaccggcgatatc
gaacaagtccccaatacgttctccgccatcaaaatcaacggccagcgtgcctacgacttg
gctcgcgaaggcaaggatgtggaactcaaaccccgcccggtcaccatcagcgaattcacc
gtgctggatatccgcagcggattcgtagcaggggagcaggccgctgaaccattgcgggaa
gacgcgaacacgggagcgattcccgcacttgatgttgacgtgcggatcagctgttcatcg
ggcacctatatccgcgcgctcgcccgcgatctcggcaaagaacttggcgtcggcggatac
ctgacccgtttgcgccgtacgcgagtcggccgattcgcgttgccggacgatgccagcgga
cttatcgctcctgaggcgatgcttgacacgcgaacccataccgtcaccgcacataccgat
cagaagacgttcactaatcgggaagggcaaaccgtcacgcgcaacaagtgcgtattggac
actcctgaaggtcttgccggtgacgagcgccgcaactggctgcttgaccatgcccttacc
atggaacaggccgctcgaggtgcgatgccggcgcttgacatcactcctgaggaggccagc
gaattacgcttcggccgccgtattgagcgtacaatcagcgagcccactgccgccattgtg
ccgcaaacgcatgatgtggcggcgattatcgagcgtgcaaacgctcatcaggccaagccg
gtcaccgtattccccctcgcgtaa
DBGET
integrated database retrieval system
