KEGG   Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_00656
Entry
BLNIAS_00656      CDS       T01845                                 
Symbol
hsdR
Name
(GenBank) HsdR-like protein of type I restriction modification system
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
blk  Bifidobacterium longum subsp. longum KACC 91563
Brite
KEGG Orthology (KO) [BR:blk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:blk02048]
    BLNIAS_00656 (hsdR)
Enzymes [BR:blk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BLNIAS_00656 (hsdR)
Prokaryotic defense system [BR:blk02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BLNIAS_00656 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like EcoR124_C ResIII HSDR_N DEAD DUF6610
Other DBs
NCBI-ProteinID: AEI97014
LinkDB
Position
549071..552361
AA seq 1096 aa
MIFDSESVFEENVITVLKQHGWKDGVLRYPTERDLLDNWKDILYRNNNDIDRLGKYPLTD
GEMTQIIEQIETLRTPLALNSFVNGRTVSITRDNKEDVAHFGKEVSLYIYDRKEIAGGKS
TYQIAQQPVYPAKNKMLNSRRGDLVLLINGMPLIHIELKKSGIPVSQATNQIEKYAHEGV
FTGLFRLVQIFVAMNPDDAVYFANPGVDKFNPSYYFHWADYNNEPICGGQNPGKDEWKLF
IGGTSGTAGLLSIPMAHQLIGFYTIADSADGCLKVLRSYQYIAANAISDVVRKCDWEQRP
ATPGRPGGYVWHTTGSGKTMTSFKSAQLIADSHDADKVVFLMDRIELGTQSLKEYRSFAD
SETEVQGTENTGVLRDKLNSTNVNDTLIVTSIQKMSNVKTGERGVTQTWLDQLAERRIVF
IVDECHRSTFGDMLQNIRRSFPNALFFGFTGTPILDENQKKNSTTAMVFGRCLHRYSIAD
GIRDHNVLGFDPYMVTTYKDSEVRRAVALDKAKVESTEDALADPVKAKVFQHYMDKSEVP
MGPMVDGAGNCISGIEDFLGRDQYGIDSPHPNMVVSDILEQFPVLSHAGKFHAMLATSSI
PEAVNYYHLFKQQAPKLHVTALFDPNIDNNEGATDKEDALTEIITDYNEAFGKEFIIPTW
PAMKKDISSRLSHKSPYGGIATNRSQQLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYESI
IQAFSRTNRLFGPDKPFGVIRYYRKPHTMHGFIEAAVKLYSGDRPLDLFVQKLPANVKSM
DTRYREILDVFSDNGESDLMQLPESVEARRKFAKEFVELNRYLEAAKVQGFDWSTTEYKV
DSTDTDDTNEDNDEHDESEVVRPQIDERTYLILAQRYKELFYGNSSCGGDSDDGVKNNPE
APYELDGYLTEINTGLIDTDYMNANFNKWLKALKENSPELAEMSAQLHRSFAALSRDEQR
LAELFLHDVERGDVEVEAGITLRDYITRYAAREKNEQVDKLVDRLGVNRSVVEEFLAKRI
DEANINEFGRFDVLRSSIDVHRAKAFFEQCDHTPLPVFKVRMRATNMLRRFVLIGGFDID
DAYDTDTQDGMEGKHH
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgatattcgatagcgaatcggtgtttgaggaaaacgtcatcaccgtgcttaagcagcat
ggatggaaggacggtgtcctgcgctatccaactgagcgggatttgctcgacaattggaaa
gacatactgtaccgcaacaacaacgacatagacaggcttggcaaatacccgctgacggac
ggggaaatgacccagataatcgagcagatcgagaccctgcgaacgccgctcgcgctcaat
tcgttcgtcaacgggcgtaccgtgtctatcacgcgtgacaacaaagaagatgtggcgcat
ttcggcaaggaagtcagtctctacatctatgaccgcaaggaaatcgcgggcggcaaaagc
acttatcagatcgctcagcaaccggtctatccagccaagaacaagatgttgaactcgcgg
cgcggcgacctcgtgcttctcatcaatggcatgccattgatccatatcgagctcaagaaa
agtggcataccggtcagccaagcaaccaatcagatcgagaaatatgcgcacgaaggtgtg
ttcaccggcctgttccgtctagtacagatttttgtggccatgaaccccgatgacgccgtc
tacttcgctaatccgggtgtagacaaattcaatccaagctattacttccattgggctgac
tacaacaatgagcctatctgcggcgggcaaaaccctggcaaagacgaatggaagctgttc
atcggaggcacctccggtaccgcaggcctgctgtccattcccatggcgcatcagctcatc
ggcttctacaccatcgctgattcagcggatggatgccttaaggtgctgcgtagttatcag
tacatcgcggcaaacgccatctccgatgtggtgaggaaatgtgattgggaacagcggcca
gctaccccaggacgacccggcggctatgtatggcacaccaccggttccgggaaaaccatg
accagcttcaaatcggcgcaactcatcgccgattcgcatgacgccgataaagtcgtgttc
ctcatggaccgcatcgagctgggtactcaatcgttgaaggaataccgcagctttgccgac
agcgagacggaagtgcaaggcaccgagaacaccggtgttttgcgggacaaactcaacagc
accaatgtcaacgacactctgatcgtcacctcaatccagaagatgagcaacgtgaaaaca
ggggagcgaggcgtcacacagacctggctggatcagctagctgaacgacgtatcgtcttt
attgtggacgaatgccatcgttccacattcggcgacatgttgcagaatatccgtcgctct
ttcccaaacgcgctgttcttcggatttaccggtacgccaattctggacgaaaaccagaag
aagaattccaccactgccatggtattcggccgttgcttgcaccggtacagcatcgccgac
ggcattcgtgaccataatgtactcggattcgacccgtacatggtgaccacgtacaaggat
tctgaagtcagacgtgccgtggctctcgacaaggcgaaggtggagagtacggaagatgcg
ctcgccgacccggtcaaggccaaagtattccagcattacatggataagtctgaggtcccc
atgggtccgatggttgatggcgctggaaactgtattagcggcatcgaggatttccttgga
cgagaccaatatggcatcgactccccgcatccgaacatggtggtctcggacattctcgaa
cagttcccggtgctcagccatgcgggcaaattccatgcgatgctcgccactagctccatt
cctgaagctgtcaactattatcacttgttcaagcagcaagcacctaagttgcatgtaacg
gcgttgttcgatcccaacatcgacaacaacgaaggagcaacggacaaagaagatgcgctg
actgaaatcatcaccgattacaatgaggcgttcggcaaagagttcatcatccccacatgg
ccggcgatgaagaaagatatttcgtcgcgactatcgcataagagtccgtacggcggcata
gcaacaaaccgcagtcagcagctcgatttgctcattgtcgtggaccagatgcttaccgga
tttgactcaaaatgggtgaatacgttgtatctcgacaagattatcgactacgaaagcatc
atccaggcattcagtcgcacgaatcgtctgttcggaccggacaagccgttcggtgtcatt
cgctactaccgcaaaccgcacaccatgcatggcttcattgaagcagcggtgaaactgtat
tcgggcgatcggccgcttgacctgttcgtacagaaattgccggcgaacgtaaaatccatg
gatacgcggtaccgggagattcttgacgtgttctcggataacggggaatcagaccttatg
cagttgccggaatcggtggaggctaggcgcaagtttgccaaggagttcgtggagttgaac
cggtaccttgaagcggcgaaagtgcagggctttgactggagtaccacagaatacaaggtc
gatagtacggatactgacgatacgaatgaggacaatgatgagcatgacgagtctgaagta
gtgcgtcctcaaatcgacgaacgtacatacctcattcttgcgcaacgctataaagaactg
ttctatggcaatagcagctgcggtggtgattcagatgatggcgtaaaaaataatcccgaa
gcgccatatgaattggatggctatcttaccgaaatcaataccggactcatcgataccgat
tacatgaatgccaacttcaataaatggctgaaggcgctcaaggagaatagcccggaattg
gcggagatgtctgcgcagctacaccgttcctttgccgcgctctcgcgggacgaacaacga
ctcgccgaactgttcctgcatgacgtggagcgtggcgacgtggaggttgaagccggcatt
acgctacgtgattacatcactcgctatgctgcgcgagagaagaacgagcaagtcgacaaa
ctagtcgatcggctgggcgttaataggtcggtggtcgaggagttccttgccaaacgtata
gatgaagcgaacatcaacgagttcgggcgtttcgacgtgctgcgctcctcgattgacgta
catcgagcgaaagctttcttcgagcaatgcgatcacacaccattgccggtgttcaaagta
cgcatgcgtgccacaaatatgttgaggcgctttgtgcttataggcggattcgacatcgac
gatgcctatgatactgatactcaagacgggatggagggcaagcaccactag

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