Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_00865
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Entry
BLNIAS_00865 CDS
T01845
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
blk
Bifidobacterium longum subsp. longum KACC 91563
Pathway
blk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BLNIAS_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
blk03400
]
BLNIAS_00865
DNA repair and recombination proteins [BR:
blk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BLNIAS_00865
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLNIAS_00865
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
T_hemolysin
Motif
Other DBs
NCBI-ProteinID:
AEI97151
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Position
711462..712181
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AA seq
239 aa
AA seq
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MSLYRDEGVVLRTSKLGEADRIITILTRGHGKIRAVAKGVRRTKSRFGARLEPFMRVDVL
IAEGRSLDVVSQAEAVAAYGAPIAADYAAYEAANVIVETIDKLASTEHEQLPNQYRLLIG
ALNALAKQSHAPQAIGDSYVMRALALAGWTPRLGTCVVCGKAEPAYLSIASGGVMCEADH
TTDARRIAPFVLNQFDALIRGDWSVLDAAPVERVVQELVEDWGEYYLERPIRSLRLIDS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtaccgagacgaaggtgtggtgttgcgcacctccaaactgggcgaggctgat
cgtatcatcaccatcctgacgcgtgggcatggcaagattcgggcggtcgccaaaggcgta
cgtcgcaccaaatcacgcttcggtgccaggctcgagccgttcatgcgcgtcgatgtgctt
atcgctgaaggccgctcgcttgacgtggtatcccaagctgaagcggtcgccgcttatggt
gctccgatcgcggcggattatgcggcgtatgaggccgccaacgtcatcgttgagactatc
gataaactcgccagcaccgaacatgagcagttgccgaaccaatatcggctgctcatcggc
gcgttgaacgcgctcgccaaacaatcccacgccccgcaagccataggcgactcctatgtg
atgcgcgccttggccttggccggttggacgccgcgattgggcacttgcgtggtatgcggc
aaggcggagccggcgtacctgtccatcgcgtccggcggcgtgatgtgcgaagccgaccac
actaccgatgcgcgccgtatcgcaccgttcgtgttaaaccagttcgatgcactgattcgt
ggcgattggtcggtgcttgatgccgcgcctgtggagcgggttgtgcaggagttggttgaa
gattggggggagtattacctcgaacgcccgattcgttcgctgcgcttgatagattcatga
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