Bifidobacterium longum subsp. longum KACC 91563: BLNIAS_02469
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Entry
BLNIAS_02469 CDS
T01845
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
blk
Bifidobacterium longum subsp. longum KACC 91563
Pathway
blk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
blk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BLNIAS_02469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
blk03021
]
BLNIAS_02469
03019 Messenger RNA biogenesis [BR:
blk03019
]
BLNIAS_02469
Transcription machinery [BR:
blk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BLNIAS_02469
Messenger RNA biogenesis [BR:
blk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BLNIAS_02469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
SAP
Spore_III_AA
NACHT
FANC_SAP
Motif
Other DBs
NCBI-ProteinID:
AEI98232
LinkDB
All DBs
Position
complement(1963157..1965226)
Genome browser
AA seq
689 aa
AA seq
DB search
MANSQNLEDMKLPELKELAKQMGLRGTSTMRKPELLATLQAARNGGEPPAGVTVRAPKAA
KTAKVVKAPQSDAAEANTTDNADVATQSPAPAPAATEPQLDLPLPVADDAKKDETEPRRT
RRKAADDAASEPRAARRRRDDDQPDFARRKPRKKADEAGDLLATLDLGDAAPTERRRERH
EDVEVPLIRRVRDDEDEQPRRRRRTAENSEETVRDLDDILATLPTQKHEETSEDGEQNDD
HEFVRRNRRDRSDRNDRDTRNDRSDRRNRRMRGRDRDNADDDRRYDDRDNRSDRNDRDSR
REEPQEDLVPVAGIVDVLDSYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGSIRA
PREGDRRNQRQKFVPLQAIDSINGQSVEEALNRPQFSKLTPLYPQERLKQETAPNKLTGR
IMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANSIAANNPEVHLMVVLVDERPEEVTDME
RTVQGEVISSTFDRPASDHTTVAELAVERAKRLVELGQDVVVLLDSMTRLARAYNIAAPA
SGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGN
MELRLSRELADKRLFPAIDINASGTRREELITNPQELPIIYRLRRLLGGMEPEQAYQTLV
PRLKKTATNRDFLAAIVQQANTGNAVNGN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagccagaatcttgaggatatgaagctgcctgagctcaaagagctcgctaaa
cagatgggcctgcgcggcacgtcgaccatgcgcaagcccgagctgctcgccaccctgcag
gcggcgcgcaatggtggagagccgccggccggtgtgaccgtgcgcgcccccaaggccgcc
aaaaccgccaaggtcgtcaaggctccgcagtccgatgccgctgaggccaacaccacagac
aatgctgacgtggccacccagtcgccggctccggctccggctgccacggaaccgcagctc
gatttgccgcttcccgtggccgacgatgccaagaaggacgagaccgaaccgcgacgcacc
cgtcgtaaggccgccgatgatgccgcatccgaaccgcgtgcggcccgccgtcgtcgcgat
gacgaccagcccgatttcgctcgccgcaagccgcgcaagaaggccgatgaggccggcgat
ctgctggccacgctcgatttgggagatgcagcgcctaccgagcgtcgccgcgagcgtcac
gaggacgtggaagttccgctgattcgccgagtccgtgatgatgaggacgagcagcctcgc
cgccgtcgtcgcactgcggaaaacagcgaagaaaccgtgcgtgacctcgacgatatcctg
gccacgctgcccacgcagaagcacgaggaaacgtccgaagacggcgagcagaacgacgat
cacgagttcgtgcgtcgtaaccgccgcgaccgtagcgatcgcaacgatcgcgatacccgt
aatgatcgcagcgatcgccgtaaccgtcgcatgcgtggccgtgatcgcgacaacgccgat
gatgatcgtcgctatgatgatcgcgataatcgtagcgatcgcaatgaccgtgatagccgc
cgcgaagagccgcaggaggatctggtgccggtggccggcatcgtcgacgtgctcgactcc
tacgcttttgtgcgcacttccggctacctgcccggcccgaacgacgtgtacgtttccatg
ggccaggtcaagaagtacggcctgcgcaagggcgatgccgtgcatggttcgattcgcgcc
ccgcgtgaaggcgaccgccgcaaccagcgccagaagttcgtgccgctgcaggccatcgat
tccatcaacggccaaagcgttgaagaagcgctcaaccgtccgcagttctccaagctcacg
ccgctgtacccgcaggagcgtttgaagcaggagaccgccccgaacaagctcaccggccgt
atcatggacatcgtttccccaatcggcaagggccagcgtggcctgattgtctccccgccg
aaggccggtaagaccatcaccctgcagaacatcgccaactccatcgccgccaacaacccc
gaggtccaccttatggtggtgctcgtggacgagcgacccgaagaggtcaccgatatggag
cgcacggtccagggcgaggtcatttcctccaccttcgaccgtccggcctccgatcacact
acggttgccgaactggccgtcgaacgcgccaagcgtcttgtggagctcggccaggacgtg
gtcgtactgctcgattccatgacccgactggctcgcgcttacaacatcgcagcccctgcc
tccggccgcatcctgtccggtggtgtggacgcgcaggccctctacccgccgaagaagttc
ttcggtgcggcccgcaacatcgaaaacggcggctccctgaccatcatctcatctgcgctg
gtggaaaccggctccaagatggacgaggtgattttcgaggagttcaagggcaccggcaac
atggaactgcgcctgtcccgcgagctggcggacaagcgactgttcccggccatcgacatc
aacgcttccggcacccgccgcgaggagctcatcaccaacccgcaggaactgccgattatc
taccgtctgcgtcgactgctgggcggcatggagcccgagcaggcctaccagacgctggtg
ccgcgcctcaagaagaccgccaccaaccgcgacttcctcgccgccatcgtgcagcaggcc
aacaccggcaacgcggtcaacggcaactga
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