Bifidobacterium longum subsp. longum JDM301: BLJ_0144
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Entry
BLJ_0144 CDS
T01240
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Pathway
bll03030
DNA replication
bll03430
Mismatch repair
bll03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLJ_0144
03430 Mismatch repair
BLJ_0144
03440 Homologous recombination
BLJ_0144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bll03032
]
BLJ_0144
03400 DNA repair and recombination proteins [BR:
bll03400
]
BLJ_0144
Enzymes [BR:
bll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLJ_0144
DNA replication proteins [BR:
bll03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLJ_0144
DNA repair and recombination proteins [BR:
bll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLJ_0144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_22
zf-CXXC
AAA_14
AAA_19
DEAD
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
ADG99637
UniProt:
D6ZXJ1
LinkDB
All DBs
Position
182786..185596
Genome browser
AA seq
936 aa
AA seq
DB search
MALALYRRYRPDTFEGVIGQDQVTVPLMRALDEGKLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLETICDKEGIRPEPGVLKLAMRAGGGSMRDTLSVLDQLMVGSVEGVITHDAAV
ALLGFTPEALIGEAVDAVINHNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLA
GDCAESVLSDTAEAEDMDDLHRQAKALGLGALTAMADIINTTLGAMTGAISPRMRLELLA
ARLLAGSESGFATAAPAPASSGMPPAAASSTSTTSAASGTGASGFAGASRGGFAGASHGG
FSGAARNQQAAAPQSTASHESAVGDNGPVSDRPAGSPSAQPAAATAAANAWGAPATSPAV
PAQPVTSPAASDNRSIDEKWDAAVAALPETIREYVSRDKVPTVKFGPNRKSLPCLSMTFD
KSLSQHAFALAVDNSGKKAASVVLDAVRNEFGANAVIAPSAVAANGERVESVKRMSPEQL
AKVKQQIAMAKAGLAASSLGAGLGIHMGSEPKAPKPTATGQAEDTDDSHRAGQSSASTAA
KSWSDDDPWAKPAVSNASPQSADGFAPNEPAAAPAPEEHHKKHVAVPDISDGVDPWAAPA
APVAPVASVASAGPTGQSTGQPATAAPATAVAGASDDPWNQPQSQATASLALQPVEADPW
NQPYQQSPHDDPWNQPQGNHAQAAPQPRDDPWNQPQSQTPASSVPQTVSGNMSGDDPWNQ
PQSVPQPAAGDDPWNQPQPAQPTPNADPWNSQPQPQPQVAAEDDEYSMNDQSLGEATAMN
LDDLKKLFEVKKVEQFAADDPKNPKNIQPAKKHSDE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcactgtatcgtcgctatcgtccggacaccttcgaaggggtcatcggccag
gaccaagtcacggtcccgctgatgcgcgccttggacgaaggcaagcttacgcatgcctat
ctgttctcagggccgcgaggatgcggtaaaaccagctccgcgcgtatcctggcccgttgc
gtcaactgtgccaaagggccgacttcccacccctgcggcgaatgcgaaagctgcaaggac
ctggccaccggcggtccgggttccatcgacgtggtcgaaatcgatgcggcctcgcacaac
ggtgtggatgatgctcgagaattgcgagaacgcgctggtttcgcccctgcgcgcgaccgc
tataagattttcattctcgatgaggcccatatggtcacgcagcagggcttcaatgcgctg
cttaaaatcgttgaagagccgcctgaacatgtgatgttcatcttcgccaccaccgaacca
gacaaggtgatcggcaccatccgttcgcgcacccaccactatccgttccgtctggtgccg
caggaagtcatgggtccctacctggagacgatctgcgacaaggaaggcatcaggcccgag
cccggtgtgctgaaactggcgatgcgcgccggtggcggctccatgcgagataccctgtct
gtgcttgaccagctgatggttggttcggtcgaaggcgttatcacccatgatgccgctgta
gccctgctcggcttcacgccggaggcgctgatcggtgaggcagtggatgcggtaatcaat
cacaacggcgaagccctgtacggcgttatccagaaagtcgtggtcggcggattcgatccg
agacgattcgtcgaagacctgctggctcgtgtgcgtgatctgctggtgcttacgttggcc
ggggactgtgcggaatccgtgctgtccgacacggctgaggccgaggatatggacgatctg
caccgccaagccaaggcgctgggactgggcgcactgaccgccatggcagacatcatcaac
actacgttgggtgccatgaccggagccatttctccgcgtatgcgcttggaactgctggcc
gcacgattgttggccggcagtgaatcaggctttgcaacagccgctcccgcgccagcttct
tctggcatgccgcctgcggctgcttcttcgacttcgactacgtcagccgcttccggtacg
ggtgccagtggttttgccggcgcatcgcgaggcgggtttgccggagcctcacatggtgga
ttctccggtgctgcacgcaaccagcaagcagccgcgcctcagagcaccgcttcccatgaa
tccgctgtgggagacaatggcccggtcagcgaccggcccgcgggctctccgtctgcgcaa
cctgccgcagcaactgctgctgccaatgcctggggtgctcccgccacgtcgccggccgtc
ccggcccaaccggtgacctcgcctgcggcatcggataatcggtccatcgacgagaagtgg
gatgcagccgtcgccgctttgccggaaaccattcgtgaatatgtgtcacgagacaaggtg
ccgaccgtaaaattcggtcccaaccgtaagagtctgccttgcctgtcgatgacgttcgac
aagtcgctgagtcagcacgctttcgccttggccgtggacaacagcggtaagaaggcggcg
tccgtggtgttggatgccgtgcgcaacgagttcggtgccaatgcggttattgcaccttct
gcggtcgcggcgaatggcgagcgagtcgaatccgtcaaacgtatgagcccggagcaattg
gccaaggtcaagcagcagattgccatggccaaggccggattggccgcgtcgagtttgggc
gcgggtctgggcattcatatggggagcgagccgaaagctccgaagccgactgcaacaggc
caagccgaggatacggacgacagccatcgagccggccaatccagtgcatccacggcggcg
aagagctggagtgacgatgacccttgggccaagccggccgtaagcaacgcttcaccgcaa
tctgcagacgggttcgcacctaacgagcccgctgctgcgcctgcgcccgaagagcatcac
aagaagcatgttgcggttccggacatcagtgatggtgttgatccgtgggccgctccggct
gctcctgttgcacccgttgcgtccgttgcgtccgctggacccactggacagtccacgggg
cagccagccaccgcagctcccgctacggcagttgccggcgcaagcgatgatccatggaat
cagccgcaatctcaggctacggcctcgctggcactgcaaccggtcgaagccgacccgtgg
aaccagccatatcagcagtctcctcacgatgatccgtggaatcagccgcaggggaaccat
gctcaggcggctccgcagccaagagacgacccgtggaatcagccgcagtcccagactccg
gcttcttcggttcctcagacagtgtcgggcaatatgtcgggcgatgacccgtggaaccag
ccccaatcggttccgcagccggctgccggcgatgacccgtggaatcaaccgcagcccgca
cagccgacgccgaatgccgacccgtggaatagccagccgcagccgcaaccgcaagtcgcg
gccgaggacgacgaatactcgatgaacgaccagtcgctcggcgaggcgacggccatgaat
cttgacgatctgaaaaagctattcgaggtcaaaaaagtcgagcaattcgcggcagatgat
ccgaagaaccccaagaacatccagcctgccaagaagcactcggatgaataa
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