Bifidobacterium longum subsp. longum JDM301: BLJ_0155
Help
Entry
BLJ_0155 CDS
T01240
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bll03032
]
BLJ_0155
03400 DNA repair and recombination proteins [BR:
bll03400
]
BLJ_0155
Enzymes [BR:
bll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BLJ_0155
DNA replication proteins [BR:
bll03032
]
Prokaryotic type
DNA Topoisomerases
BLJ_0155
DNA repair and recombination proteins [BR:
bll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLJ_0155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADG99648
UniProt:
D6ZXK2
LinkDB
All DBs
Position
199701..202787
Genome browser
AA seq
1028 aa
AA seq
DB search
MATKLVIVESPTKAHKIGDYLGKGYTVMASVGHIRDLAQPSQVPAADKAKFGKFGVDVND
GFKPYYIVDGDKKRTVSELKSALKNADELYLATDEDREGEAIAWHLVQTLKPKVPVKRMV
FHEITKNAINASLGKTRDVDSHMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRVQS
VATRLIVERERERMAFKRAPYWDIVAMLAAPDALGERAEFSARMIALGGKRLAGSKDFGA
DGQLTPDGFAANVRQLDEAGATAVAEALRTADFTVMSMETKPYRRRPQPPFTTSTLQQTA
GNRLGMGARVVMRAAQSLYENGYITYMRTDSVTLSQEAITAARNAVSYHFGDKFLSAEPK
QYATKTAGAQEAHECIRPAGSRFHDPDELASKLPGDQLRLYTLIWQRTLACQMADATGST
ATVRLSAPAGPTEGEAVFQASGTVIEFPGFMKATGEGRKPKAAAPGAGAGSDQAAAAGKT
DVKAVRGDASESNTSLPPMSVGQQVEASDIEPDGHETQPPARYTEATLVKTLEAKEIGRP
STYASIISTIMDRGYVYERGRALIPSWLAFSVTKLLETNFPKLVDYQFTAEMENGLDRIA
HGEESGRDWLTHFYFGSGEGAARNADEAHEGLQQQVAQLGEIDARAINTIDIGDGLHVRV
GRYGPYLEDMEHLDVEGNPKRASLPDTIAPDELTVAVARDLIDNHSGGPRELGVDPVSGG
TVEVRNGRFGPYVALVPPAEASAGAAGGTAGASAAKKGSKKAAAAAASRPKMASLFKTMS
PESLSLEDALKLLSLPREVGTYEETNAETGEVSECTVAANNGRYGPYLTKTGADGKSETR
SLASEDEIFTVDIDKAKELFSQPKYGRGRGRGAAKPPLRDLGKDPNTGKNVTIKDGRFGA
YITDGETNRTVPRQYTPESITPDDAFRLLAEKRAAGPSTRGRRGAGRAGAAKSGAKGAKK
GAASAATNAAEAKRAERRAEVKKLANKGWSNQRIAEKLSSTAATVKKDVDWLTANEGYER
PAVIPKRG
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaaactggtgattgtggagtctccgaccaaggcccacaagatcggtgactac
ctgggcaaggggtacaccgtcatggcgtcggtcggtcatatccgcgacctcgcgcagccc
agccaggtgcccgcggcagacaaggccaagttcggcaagttcggcgtggacgtcaacgac
gggttcaagccgtattacatcgtcgacggcgacaagaagcgtacggtcagcgaactcaaa
tcggccctgaagaacgccgacgaactctatctggcgactgatgaggatcgcgagggcgag
gccatcgcgtggcacttggtgcagaccttgaaacccaaggtgccggtcaagcgcatggtg
ttccacgagatcaccaagaacgccatcaacgcctcgctgggcaaaacgcgcgatgtcgac
agccatatggtcgacgcacaggagacccgccgcatcctcgaccgtctgtacggctatgag
ctgtcgccggtgctgtggcgcaaggtgggcccgggcctgtccgccggccgcgtgcagtcc
gtggccacccgcctgatcgtggaacgcgaacgcgaacgcatggcattcaagcgtgcgccg
tactgggatatcgtcgccatgttggccgcgcctgacgcgctgggggagcgtgccgaattc
tccgcccgcatgatcgcgctcggcggcaagcgactcgccggctccaaggatttcggtgcc
gacggccagctgaccccggacgggttcgcggcgaacgttcgccagcttgatgaggctggt
gccactgccgtggctgaagcgctgaggaccgccgatttcactgtgatgtcgatggaaacc
aagccgtaccgccgccgcccgcagccgccgttcaccacctcgaccctgcagcagaccgcc
ggcaatcgcctcggcatgggtgctcgcgtcgtgatgcgcgcggcccaaagcctgtacgag
aacggctacatcacctatatgcgaaccgattcggtgacgctgtcgcaggaggccatcacc
gccgcccgcaacgccgtctcctaccatttcggcgacaagttcctctccgccgagcccaag
cagtacgccaccaaaaccgctggcgcgcaggaagcccacgagtgtattcgcccggcgggc
tcgcgcttccacgacccggatgagctggcttccaaacttcccggcgaccagctgcgccta
tacacgctgatctggcagcgcacgctcgcctgccagatggctgacgccaccggctccacc
gccaccgtgcgcctgtctgcgccggccggccccaccgagggcgaggccgtgttccaagcg
tccggcactgtcatcgaattccccggctttatgaaggccacgggggaggggcgcaagccc
aaagccgccgctcccggcgctggggctggctcggaccaggctgctgccgccggcaagacg
gacgtcaaggccgtcaggggtgacgcctccgaatccaacacctccctgccgccgatgagc
gtcggccagcaggtcgaggcaagcgacatcgaaccggacggccatgaaacccagccgccg
gcccgttataccgaggccacgctggtcaagacgctggaagccaaggaaatcggtcgcccg
tccacttacgcgagcatcatctccacaatcatggatcgcggttacgtatacgagcgtggc
cgtgcgctgatccccagctggctcgccttctccgtgaccaagttgctcgagacgaacttc
cccaagctggtcgactaccagttcaccgccgagatggaaaacggccttgaccgcatcgcc
cacggcgaggaatccggccgcgactggctcacccacttctacttcggttccggcgagggc
gccgcccgcaacgccgacgaggcgcacgaaggcctgcaacagcaggtcgcgcagctcggc
gagatcgacgcgcgcgccatcaacaccatcgacatcggcgacggcctgcacgtgcgcgtc
ggccgttacggcccgtatctggaagacatggagcatctggacgtcgaaggcaacccgaag
cgcgcgtctctgccggacaccatcgcgccggatgagctgacggtggccgtggcccgcgat
ttgatcgacaaccactccggtggaccgcgcgagctgggcgttgacccggtatccggcggt
accgtcgaggtgcgcaatgggcgtttcggcccgtatgtggcgctggtgccgccggctgag
gcttcggctggcgctgctggcggtactgctggtgcttctgcggccaagaagggttcgaag
aaggccgcggccgccgccgcgtcgcgcccgaagatggcctcgttgttcaagacgatgagc
cctgaatcgctgtcgctggaagacgcgctaaagctgctgagcctgccgcgcgaagtgggc
acatacgaggaaaccaacgccgaaaccggcgaggtatccgaatgcacggtggccgccaac
aacggtcgctacggcccctatctgaccaagacgggtgccgacggcaagtcggagacccgc
tcgctggcctcggaagacgagatcttcacggtcgatatcgacaaggccaaagaactgttc
tcgcagcctaagtacggccgcgggcgtggccgtggtgccgccaagccgccgctgcgtgat
ttgggcaaggacccgaacaccggcaagaacgtgaccatcaaggacggccgtttcggcgcg
tacatcaccgatggcgagaccaaccgcacggtgccgcgtcagtacacgcctgaatccatc
acccctgatgacgccttccgactgctcgccgaaaagcgtgcggctggtccctccacccgt
ggccgtcgcggtgctgggcgtgccggtgccgcgaagtcgggagccaagggagccaagaag
ggcgctgcttcggctgcgaccaatgccgccgaggccaagcgcgccgaacgccgtgccgag
gtgaagaagctggcgaacaagggctggtccaaccagcgcatcgccgaaaagctcagctcc
accgccgccaccgtcaagaaggatgtcgactggctgaccgccaacgagggctacgagcgc
cccgccgtaattcccaagcgtggctga
DBGET
integrated database retrieval system
