Bifidobacterium longum subsp. longum JDM301: BLJ_0716
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Entry
BLJ_0716 CDS
T01240
Symbol
rpsA
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Pathway
bll03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BLJ_0716 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bll03011
]
BLJ_0716 (rpsA)
Ribosome [BR:
bll03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BLJ_0716 (rpsA)
Bacteria
BLJ_0716 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RNase_II_C_S1
S1_2
OB_RRP5_4th
Caudal_act
Motif
Other DBs
NCBI-ProteinID:
ADH00188
UniProt:
D6ZTI2
LinkDB
All DBs
Position
873639..875114
Genome browser
AA seq
491 aa
AA seq
DB search
MAENNTEVTKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEAVFVKVIDVDLDRRRISL
SLKQANDSVDPASEDFDPAIYGMPAEYDEQGNYKYPEGFDPNTNEWIAGYEKQREEWESQ
YAAAHELWEEHKEFVAKELENAAESAAADGQGPKEEKPVEETSNYSSAAPATGTLADSDQ
LAALRDQLLGK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacaacactgaagtcaccaaggttgccatcaacgacatcggcaccgaagag
gacttcatcaaggcagtcgattccaccatcaagaacttcgatgatggtgatctggttgag
ggcaccgtcgtcaagatcgatcacgacgaagtcctcctggacatcggctacaagaccgag
ggtgtcatcccctcccgcgagctttccatcaagaaggacgttgatcctgacgaagtcgtc
gaggtcggcgacaccatcgaggcccttgtcgtcaccaaggaagacaaggaaggccgtctg
attctgtccaagaagcgtgcccagtacgagcgcgcctggggcgacatcgaaaagatcaag
gaagctgacggcgtcgttgagggcaccgtcatcgaagccgtcaagggcggcctcatcgtc
gacatcggtctgcgtggcttcctgcctgcctccctcgtcgagatgcgtcgcgtccgcgac
ctctccccgtacatcggccagaagatcaaggccaagatcctcgagctcgacaagaaccgc
aacaacgtggtcctgtcccgccgccagtacctcgaggagacccagtccgaggtccgcgag
accttcctgtcccagctcaagaagggccagattcgtgagggcgtggtgtcctccatcgtc
aacttcggcgctttcgtcgatctgggcggtgttgacggcctgatccacgtttccgagctg
tcttggaagcacatcgaccacccgtctgaggtcgtcaaggtcggcgacaaggtcaccgtc
gaggtgctcgacgtcgatctcgaccgtgagcgtatctccctgtccctgaaggcgactcag
gaggatccgtggcagcgcttcgctcgcacccacgttcccggccagatcgtcaagggcaag
gtcaccaagatcgtccagttcggtgtcttcatctccgtcgaggacggcatcgagggcctg
gtgcacatctccgagctcgccaaccgtcacgtcgagaacccggagaccgtggtcaagccg
ggcgaggccgtgttcgtcaaggtgatcgacgttgacctcgatcgtcgccgcatctccctg
tccctcaagcaggccaacgactccgtcgacccggcttccgaggacttcgatccggccatc
tacggcatgccggctgagtacgacgagcagggcaactacaagtaccccgaaggcttcgac
ccgaacaccaacgagtggatcgctggttacgagaagcagcgcgaggagtgggagtcccag
tacgccgccgcccacgagctgtgggaggagcacaaggagttcgtggccaaggagctggag
aacgctgccgaatccgcagccgccgacggccagggcccgaaggaagagaagccggtcgag
gagacctccaactactcttccgccgctccggctaccggtaccctcgccgactccgatcag
ctcgccgccctgcgcgaccagctgctcggcaagtga
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