Bifidobacterium longum subsp. longum JDM301: BLJ_1168
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Entry
BLJ_1168 CDS
T01240
Name
(GenBank) DNA gyrase/topoisomerase IV, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
bll
Bifidobacterium longum subsp. longum JDM301
Brite
KEGG Orthology (KO) [BR:
bll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bll03032
]
BLJ_1168
03400 DNA repair and recombination proteins [BR:
bll03400
]
BLJ_1168
Enzymes [BR:
bll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BLJ_1168
DNA replication proteins [BR:
bll03032
]
Prokaryotic type
DNA Topoisomerases
BLJ_1168
DNA repair and recombination proteins [BR:
bll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BLJ_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Inp1
Motif
Other DBs
NCBI-ProteinID:
ADH00619
UniProt:
D6ZUR3
LinkDB
All DBs
Position
1358939..1361668
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AA seq
909 aa
AA seq
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MASHRKPSVQTYDPRTVKEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR
IVYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG
NFGSLDDGPAASRYTEARLGPAALGMNADIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLV
NGGSGIAVGMATNLATHNLGEVVNAAKFLMAHPDATLEQLMRYVPGPDWPTGGTIIGRDG
IREAYANGRGTLTTRAATHIEHVTARKQAIVVTELPYMVGPEKVIERISDGVKNRKLEGI
SGAFDLTDRHNGTRIVIEIKTGFDPHAVLVQLFKHTPLQDNFAMNNVALVDGRPHTMGLK
EMLQVWVDHRRVVIRRRSEYRKKKALERLHLVEGLLLAMLDIDEVIQVIRTSDDADAAKT
RLMAVFDLDEVQAQYILDLRLRRLTKMNRIELEAERDDLKKRIEELTRILASAEALDQVV
TDEMDEAVAKWGSPRRTVLLDADPDGTLTPVVAQGAGASGVSKSALEAVKAATTISSAEA
DVAAAAAAAKKTGERSALTGALKIEDEPCVVMMSATGLIARTTPSAMDVFNVRSTSDERL
RDDQITTIFETSTRATYGLVTSAGRLVLAHVVDLPALPASATLSLKGGVQADELIGMTES
TDPIRGERVITAIAMEQPTSGKASAKDESEDGGAAEAKPLPSLAIGTRNGVIKRWNREAP
TTMDSWPVIDLKDGDEVVFAAVAEDDDRLVFISSDSSLLTFEAKNVRPQGRTAGGMAGIK
LAEGARVAAFNVVPAGKVAWTYEEGENGLTSGSGAVVLTVAGDSDALPGTENGAAKVTPL
EMYPTKGRATGGVRSQRFLKGQNTLILAWVGLYPLHASTSAGSPVELPKPDMRRDGSGVD
LASPIAFIA
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaccgcaaaccgtccgtgcagacctacgatccgcgcacggtcaaggagcat
atcgtcgagacgccgctgaacgaggagatgagcaagtccttcctcgagtatgcgtattcg
gtgatttacgcacgcgcactgcccgatgcgcgcgacggcctgaagccggtgcagcgccgc
atcgtctaccagatgggcgagatgaacctgactcccgaccgcccgtatatgaagtccgcc
cgcgtggtgggcgaggtgatgggcaagctccacccgcacggtgattccgcgatctacgag
gccatggtgcgtttggcacagccgttcgcgatgcgtttgccgctggtggacggccacggt
aacttcggctcgctggatgacggccctgcggcctcccgttacaccgaggccaggcttggc
ccggcggctctcggcatgaacgcggatatcgacgaagacaccgttgacttcacgccgaac
tacgacaacaagctcaaggaaccgaccgtgctgccggccgccatcccaaatctgctggtc
aacggcggttcgggcatcgccgtaggcatggccaccaatctggccacgcataatctcggc
gaagtggtgaatgctgcaaagttcctcatggctcacccggacgccacgcttgaacagctg
atgcgctatgttccgggccccgactggcccaccggaggtacgatcatcggccgcgacggc
attcgcgaggcctatgccaacggccgtggtacgctcaccacgcgcgccgccacgcatatc
gagcatgtcacagcccgcaagcaggccatcgtggtcaccgagctgccgtacatggtaggt
ccggaaaaggtgatcgagcgtatttccgacggcgtgaagaaccgcaagctggaggggatt
tccggcgcgttcgatctgaccgatcgtcataacggcacgcgtatcgtcatcgagatcaag
accggtttcgacccgcatgcggtgctcgtccagctgttcaagcacacgccgttgcaggac
aacttcgccatgaataacgtggcgttggtggacggccgtccgcacacgatgggcttgaaa
gagatgctgcaggtatgggttgatcaccgtcgcgtggtgattcgccgccgtagcgaatac
cgcaagaagaaagccctggaacgcctgcacctggtcgagggcctgctcctggccatgctg
gacatcgacgaggtgatccaggtgatccgcacttcggatgatgcggatgccgcgaagacc
cgtttgatggccgtattcgatctagacgaggtccaggctcagtacattctggatctgcgt
ctgcgccgattgaccaagatgaaccgcatcgaacttgaggccgaacgcgatgacctgaag
aagcgcatcgaggagctgacccgcattctggcctccgccgaagcgctcgaccaggtggtc
accgacgagatggacgaggcggtcgccaagtggggctcgccgcgtcgcaccgtgctgctg
gacgccgacccggatggcacgctgacgccggtcgtggcgcagggcgccggggcttcgggt
gtgtccaagtccgcactcgaagcagtgaaggccgccaccacgatttcctccgccgaagcc
gatgtggccgcagccgcagccgccgccaagaagaccggcgagcggtccgcgctgaccgga
gccttgaagatcgaggacgagccgtgcgtggtgatgatgagcgccaccggtttgattgcc
cgtaccacgccaagcgcgatggacgtgttcaatgtacggtccacatccgatgaacgtctg
cgagacgatcaaatcaccacaatcttcgagacctccacgcgcgccacgtacgggctggtc
acgtcggccggccgcctggtgctcgcgcatgtggttgatttgccggcgctacctgcttct
gccacgttgtcgctgaagggtggggtccaggccgacgaactgatcggcatgaccgaatcc
accgatccgattcgcggtgagcgtgtgattacggcgattgccatggagcagccgacgtcc
ggcaaggccagtgccaaggatgagagcgaggatggcggggccgccgaggccaagccgttg
ccgtcgctggctatcggtacccgtaacggtgtcatcaagcgttggaaccgtgaggcaccc
accaccatggattcctggcccgtcattgatctgaaagatggcgacgaagtggtattcgcc
gccgtggccgaggatgacgaccgtctggtgttcatctcctccgattcctcgctactgacc
tttgaggcgaagaacgtgcgcccgcagggtcgcaccgcgggcggtatggccggcatcaag
ctggccgagggcgcccgtgtggcggcattcaacgtggttcccgccggcaaggtggcatgg
acctatgaggagggcgagaacggtttgacttccggctccggcgcggtggtgctcaccgtg
gccggcgactccgatgcactacccggcaccgaaaacggcgccgccaaggtcaccccgctg
gaaatgtaccccaccaagggccgcgctaccggtggcgtacgctcccagcgcttcctcaag
ggccagaacacgctgattcttgcctgggttggtctctacccgttgcatgcctccacatcc
gcaggctccccggtcgagcttcccaagcccgatatgcgccgagacggctccggagtggac
ctcgcctcccccatcgccttcattgcgtaa
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