Bifidobacterium longum subsp. longum JDM301: BLJ_1561
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Entry
BLJ_1561 CDS
T01240
Name
(GenBank) SNF2-related protein
Organism
bll
Bifidobacterium longum subsp. longum JDM301
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ERCC3_RAD25_C
SWIM
DUF7117
Motif
Other DBs
NCBI-ProteinID:
ADH01003
UniProt:
D6ZVU7
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All DBs
Position
complement(1868151..1872413)
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AA seq
1420 aa
AA seq
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MSKGYGVFGHVPDNADDDGLLPYEDDDSGVSWGHALRRRNPWKRGDDEDADYDDGRYDID
DTDDTNGGRGIYAGKSGGVGGISGETGGILGSSGAAGSRDVTFGGTDSLSAADAVMPYRF
RQGRSVWFDDEDEGHFAGSAKRAEAHAVPILALRNDVESSSSNAVLARARSIARKAATMV
INPVYSENHRTGYAELDGILRGTTSPSSKYRTSVQFDLDTGEAVGGKCSCPAYGRGYGMC
KHMIALAFIFCDDPQRFEGYRAGAVRPSRTLIDYMEHVDRQDAQAKARRRNALMRRFDTA
KGRNGAGGRRTNSGYGSRAGTRGGGYQGDSETVGLGQVQLVPILSFIDGVWSVEFKIGST
SNGSSYVLKSIPQFVLAMANGDYADYGQKLAFTHTPDMFDDDSRPLLGFLDDAMAVRRAA
EQQDRYYGHIAIDRHLTLSAPEVARLLSVREGRGVQLVLNTWFSGQPASVPVDGGEPDFL
MRIARRDFNTYGPDAGYLLTGVPAVETVIDGGKNVWLLLASTNPAGVVSAMMAGSQRKSA
AGCRFVRCPKRLIPLRGLLGDMFEPDGEGQVIAGDDIALFARTLLPQLVGAGLLEASEIP
RELAELSPTECSLQFYLDRDEHGVQCEVKAHYGDAIVPLLPDGPTVHARDERSIPLSRGV
IGRDFDAEHLAIDVVREFFTMPDQRKRVAAATHQTVNGFRTPAARKAAKQFVSDAATIDR
DDTTQIVRLFDEGLPALKEVGEVFTTPAFDRLIAPKPPSVKVGLSIKGNLVEISPLADEV
PPDEVGALLSSYRRRQRFHQLKDGTLVKLSGANLSTLDRLASDLDLSEQQLNSGLIELPG
GRAFLLDGELPDDGSDVVKDASFTEYIDDLKIIDPKSYEVPDSLKHILRPYQVEGFQWLN
TLCDKGFGGILADEMGLGKSVQLIALLLSRYHNESSGMPTAQGMDAGNAVNSESAVTGHI
TFDSEDGGPHPSLIVCPASLVYNWGAEFAKFAPSFNAVVVAGAKAERRTAIGRAFRADEP
TVLITSYDLLRRDVDDYTANEQRFNVMALDEAQYIKNHTTKIAKAVKAVAADHRFALTGT
PIENRLSELWSIFDFLMPGLLGSYKRFHERYELPISNARAADGSTAEGRAATQVNPETAR
VSRQLQSLVGVFIKRRLKSQVLTDLPDKLETTLTVQLAGEQRKLYAAHEQRLRMQLEHSE
EADFNTSKIRILAELTKLRQICCDPRLLYADAKDQSAKLAAITELVETCVNEGKKALIFS
QFTSFLDLIAERFDAQGLRYYTITGSTPKKKRLELVDQFNADDTPAFLISLKAGNTGLNL
TGASVVIHADPWWNAAAQDQATDRAHRIGQTEDVNVYQVVAKDTIEERILELQHTKSELA
RQFTDASLLADEAGTGASALTEAPASIATLTKDDLLNLLG
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagggtatggtgtgtttggccatgttcccgataatgcggatgacgatggcctc
ctgccttatgaggatgatgattccggcgtttcctggggccatgcgttgcgtcgtcgcaat
ccttggaaaagaggagacgacgaagatgccgattacgacgacggtcggtatgacatagat
gacactgatgacactaatgggggcaggggcatctatgccggtaaaagcggcggagtaggc
ggtatttctggtgagacgggtggaatacttggtagctcaggcgcggccggcagcagagac
gtaacgtttggtggaacggacagtttgtccgccgccgatgcggtgatgccctatcgtttc
aggcaaggacgttccgtatggttcgacgatgaggacgaaggccatttcgccgggtctgcg
aagcgtgccgaagcccatgccgtccctatccttgcgttacgcaacgatgtggaatcgtca
tcgtcgaatgccgtgctcgctcgtgcccgtagcattgcgcgcaaagcggccaccatggtt
atcaatccggtatacagcgaaaatcatcgaaccgggtatgccgagcttgacggcattcta
cgtggcaccaccagcccatcgagtaagtatcgtaccagcgtgcaattcgacctcgacacg
ggagaagccgtcggtggcaagtgctcatgcccggcttacggccgtggctatggcatgtgc
aagcacatgattgcgctcgccttcatattctgcgatgatccgcagcgttttgaagggtac
cgtgccggggctgtgaggccgtctcggacgctgatcgactatatggagcacgtcgatagg
caagatgctcaagccaaagcgcgtcgtcgcaatgcgctcatgcgccgattcgatactgca
aaaggacgaaatggcgcaggtggacgacgtacgaatagcgggtatggctctcgtgccggc
acccgcggcggcgggtatcagggcgatagcgagactgtgggcttggggcaggtgcagctt
gttccgatattgagtttcatcgatggcgtgtggagcgtggagttcaagatcggatcgact
tccaatgggtccagctatgtactgaaatcgattccgcagtttgtgcttgccatggcgaac
ggcgactatgcggattatgggcagaagcttgcctttacccatacgccggatatgttcgac
gatgattcgcgcccactgctgggcttccttgacgacgcgatggccgtgcgtcgtgcggcc
gagcagcaggaccggtattacgggcatatcgccatcgaccgtcacctgacactttcagca
ccggaagtggcccggttgctgtccgtacgtgagggcagaggcgtacagctcgtgttgaac
acatggttctccgggcagcctgcatcggtgccggttgatggtggcgagccagattttctc
atgcgcattgcgcggcgtgatttcaatacgtatggtccggatgccgggtacctgcttacc
ggagtgccggcggtggaaaccgtgattgacggcggcaagaatgtatggctgttgctcgcc
tccactaatccggccggtgtggtatccgccatgatggcgggctctcagcgtaaaagcgca
gcaggatgccgattcgtccgttgcccgaaacgattgattccgttgcggggattactggga
gacatgtttgaacccgatggcgaggggcaggtcatcgccggcgatgacatcgccctgttc
gcacgcacgctattgcctcagctggttggcgccggattgttggaggccagtgagattcct
cgcgagctggctgaattaagccctacggaatgcagtctccagttttatctggatcgcgat
gagcatggtgtgcaatgcgaggtcaaggcacactacggcgatgccattgtcccgttgcta
cccgatggcccgacggtgcatgctagggatgagcgttccatccccttgtctcggggcgtg
attgggcgtgatttcgacgctgagcatcttgcgattgatgtagtgcgtgaattctttacc
atgcctgaccagcgcaagcgcgttgcggccgccactcatcagacggtgaatgggttccga
acgccggccgcgcgaaaggccgccaaacaattcgtgtctgatgcggccactatcgatcgc
gatgacaccacgcagattgttcgtctttttgacgagggattgcccgcactgaaggaagtg
ggggaggtcttcaccacaccggcttttgaccggctgatcgcgcccaagccgccaagcgtc
aaagtcggattgtccatcaaaggcaatttggtggagatatcacccctcgctgatgaagtg
ccgccggacgaagtgggtgccttgctgtcttcgtatcgtcggcgtcaacgattccatcag
ttgaaggacggcacgctggtcaaactcagcggcgcgaatctcagcacgttggaccgattg
gccagcgaccttgatctgagcgagcagcagctcaactccgggctgatcgagttgccgggc
ggtcgagcattcctactggatggtgagctgccggatgacggctccgatgtagtcaaggac
gcttcgttcaccgaatacatcgacgatctcaagatcatcgaccctaagtcgtatgaagtg
ccggatagtctcaagcatattctgcgcccttatcaggtcgaaggcttccaatggctgaac
acgttgtgcgacaagggttttggcggcattttggccgacgagatgggtttgggcaaatcc
gtgcagcttatcgccctgttgctgtcgcgataccacaacgaatctagtggcatgccgacc
gctcaaggcatggatgccggtaatgctgttaatagtgaatcagccgtaaccggtcatatt
actttcgattccgaagatggcgggccgcatccatcattgatcgtgtgcccggcgtccttg
gtgtacaactggggtgccgaattcgccaagttcgccccgagcttcaacgccgtggtggtg
gccggcgccaaagccgagcgccgcaccgccatcggccgtgcgttccgggcggatgaaccc
accgtgctcatcacctcatacgacctgctgcgccgggatgtcgatgattacaccgccaat
gagcaacgtttcaatgtcatggcattggatgaagcccagtacatcaagaatcacaccacg
aaaatagccaaagcggtcaaggccgtggccgccgaccatcgtttcgccttgaccggcacg
ccgatcgagaaccgactctccgaactgtggagcatcttcgacttcctgatgccgggacta
ttgggctcatacaagcgattccatgagcgctacgagctgcccatctccaacgcccgggcc
gcggatggcagtacggccgaaggtcgggccgccacacaggtcaatcctgagactgctcga
gtgtctcgccaattgcagtcgttagtgggcgtgttcatcaagcgcaggttgaagtctcag
gtgctgaccgatttgccggacaagttggagaccacgctgaccgtgcagcttgccggcgaa
cagcgcaaactgtatgcggctcacgagcagcggctcagaatgcagctcgaacacagcgaa
gaagccgatttcaacacgtcgaagattcgcatcctcgccgagctgaccaagttgcgccaa
atctgctgcgatccaaggctgctgtacgccgatgccaaggatcagtcagccaagctcgcc
gccatcaccgaactggtggaaacctgcgtgaatgaaggcaagaaggcactgatcttctct
cagttcaccagcttccttgatctgatcgccgaacgcttcgacgcgcaaggactacgctac
tacaccatcaccggatccacgcctaaaaagaagcgtctcgaactcgtcgaccagttcaat
gcggacgatacgcctgccttcctgatttcattgaaggccggcaacaccggactgaacctg
accggtgccagcgtggtcatccacgccgatccatggtggaacgccgccgcgcaggatcag
gccaccgaccgagcacatcgtatcggccagaccgaagacgtcaacgtgtatcaggtggtg
gccaaggacaccatcgaagaacgcatcttggagcttcagcataccaagagcgagctcgcc
cgccagttcaccgatgcttccttgcttgccgacgaagccggcacaggcgccagcgccctc
accgaagctcccgcctccatcgccaccctcaccaaggacgatctcctcaatctgctggga
tga
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