Bifidobacterium longum subsp. longum JCM 1217: BLLJ_0154
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Entry
BLLJ_0154 CDS
T01419
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Pathway
blm03030
DNA replication
blm03430
Mismatch repair
blm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLLJ_0154
03430 Mismatch repair
BLLJ_0154
03440 Homologous recombination
BLLJ_0154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
blm03032
]
BLLJ_0154
03400 DNA repair and recombination proteins [BR:
blm03400
]
BLLJ_0154
Enzymes [BR:
blm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BLLJ_0154
DNA replication proteins [BR:
blm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BLLJ_0154
DNA repair and recombination proteins [BR:
blm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BLLJ_0154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
AAA_16
T3SSipB
NolB
AAA_22
KTI12
DNApol3-delta_C
TniB
AAA_18
Rap1a
Motif
Other DBs
NCBI-ProteinID:
BAJ65824
LinkDB
All DBs
Position
200314..201465
Genome browser
AA seq
383 aa
AA seq
DB search
MSVWDSLVGQKPVIDMLSRIAQGDPSQITQSWLICGPPGSGRSNMARAFAAALESPDHGM
SAEPTRVTQQVLAGTHPDVTVLTTNKVTIGIDQVREIITTSEQMPATAPWRIIIIEDVDR
MLERTTNVLLKEIEEPAEHCIWLLCAPSAQDVLPTIRSRTRIVNLAVPSTQAVAGFLTST
TNVEPKVAQRAARLAEGHIGIAKLYATDERVMSDRDELVVGVLNLARASDAVLLAGNLID
NAKAQAEADANRITAGQEAEFRRINGLAPSDRIPPKLRGAFNQIAKKDDVKRLVTRRTRD
VLDRALNSIASIYRDVAVLQNNAEDSVGLINLENRSSITELSVRLNRAGAVTRLDEVAHA
RKRLAGNGNPLLVFESLFCALIP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatgggattcactagtcggccaaaagccggtaatcgacatgctcagtcgtatc
gcgcagggcgacccgagccagatcacccagtcgtggctgatctgtggacctcccggatcg
ggccgttccaacatggcccgagcattcgcggcggcgctggaaagcccggatcacggcatg
agcgctgagcccacgcgcgtcacccagcaggtgcttgccggcacgcatccggatgtcacg
gtgctgaccacgaacaaggtgactattggtatcgatcaggtgcgtgagatcatcactacc
tccgagcagatgcccgccaccgcaccgtggcgcatcatcatcatcgaagacgtggatcgc
atgcttgagcgcaccaccaacgtgctcttgaaagagattgaggagccggccgagcattgc
atctggctactgtgcgcgcccagcgcccaggacgtgctgcccaccatccgctcgcgcaca
cgcatcgtgaacctcgccgtgccctccacccaggcggtggccggattcctgacctccacc
accaatgtcgagccaaaagtggcgcagcgtgcggcccgactcgccgaaggccatatcggc
atcgccaagttgtacgccaccgacgaacgggttatgtccgaccgcgatgaacttgtggtc
ggtgtgctgaatctggcccgtgcctcggatgcagtgttgttggccggcaatcttatcgac
aatgccaaggcccaggccgaggcagacgcgaaccgcatcaccgccggtcaggaagcggaa
ttccgccgcatcaacggactggcaccgagcgaccgcatcccgccgaaactgcgtggcgca
ttcaaccagattgccaagaaagacgatgtgaagcgtttggtcacccgccgtacgcgcgac
gtattggatcgtgcgctgaactccatcgcctccatctaccgagatgtggcggtgctgcag
aacaatgcggaggattcggtgggcctcatcaacctggagaaccgctcgtcgatcaccgaa
ttgtcggtgcggttgaaccgggccggtgccgtgacccgtctggacgaagtggcccacgcc
cgcaagcgcctagccggcaacggcaacccgctactggtattcgagtccctcttctgcgcc
ctgatcccataa
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