Bifidobacterium longum subsp. longum JCM 1217: BLLJ_0671
Help
Entry
BLLJ_0671 CDS
T01419
Name
(GenBank) putative exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
blm
Bifidobacterium longum subsp. longum JCM 1217
Brite
KEGG Orthology (KO) [BR:
blm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
blm03016
]
BLLJ_0671
Enzymes [BR:
blm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BLLJ_0671
Transfer RNA biogenesis [BR:
blm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BLLJ_0671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAJ66339
LinkDB
All DBs
Position
845135..846436
Genome browser
AA seq
433 aa
AA seq
DB search
MSDVRDTEPRLLKEPRGGVPDVTSTLDGYHRVCDAMAEATGSLAADAERASGFRYGHEDW
LIQFKREGAGIALLDPVALTRAGADWNEFNDAVGDATWILHDSLMDLPGFAEIGLKPKAL
FDTEIAARLLGLHRFGLAAVTEHYLGITLAKEHSAADWSYRPLPRDWRNYAALDVEVLIE
LETMMRRDLKAAGKDEWAAEEFSHALVAGLAPRKPHPIPWLRISRITQLSRDPRGLAIAK
SLWEERDRLARQYDIAPSLLLADSSIIEAATNKPHNAAQFRALRSLNERVRIHTGTEQDK
MFERYAPIQRAVKPKVWKQAIDRAIALKPTQWPTMPAPEQDENGVVNAPRSMRLWQQRHP
ERYDRLQRVRRVINRIAEDTRTPAEMIIKPQILRNLCWVEDPVEVDVETFLIEQGARNWQ
VKLIAPSVSGVIM
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgacgtccgtgacaccgaaccccgactgctgaaagagcctcgcgggggagtaccc
gatgtcacttcgacgctggacggctatcatcgtgtctgcgatgcgatggccgaggcgacg
ggctcgctggccgccgacgccgaacgggcgtccggcttccgctatggacacgaggattgg
ctgattcagttcaaacgtgagggtgcaggcatcgccttgcttgatcccgtcgccctgacc
cgggccggagctgattggaatgaattcaatgacgccgtgggcgacgccacgtggattctg
catgattctctgatggacttgcccggattcgccgaaatcgggctcaaacccaaagccctg
ttcgacacggaaatagcggcgcgattgctcggcctgcaccgctttggtctggccgccgtc
accgaacactacctcggcatcacgctagccaaagagcattccgccgccgattggtcctac
cgtccgctgccgcgcgactggcgcaactatgcggcgctcgacgtggaggtgcttatcgaa
cttgaaaccatgatgcgtcgtgacctgaaagccgcaggcaaggacgagtgggccgctgaa
gagttttctcacgctttggttgcgggccttgccccgcgcaaaccgcatccgattccttgg
ctgcgtatctcgcgcatcacccagctgagtcgtgatccaaggggcttggccatcgccaaa
tccctatgggaggagcgcgaccgactcgcccggcaatacgatattgcgcccagcctgtta
ttggccgattcatcaatcatcgaggcggcgaccaacaagccgcacaatgctgcccaattc
cgcgcgctccgatccctgaacgagcgtgtgcgcatccataccggcaccgagcaggacaaa
atgttcgagcggtacgcgccgattcagcgtgcggtcaaaccgaaggtctggaagcaggcc
atcgatcgagccatagccctgaagcccacccaatggcctaccatgcccgcccccgaacag
gacgaaaacggtgtggtgaacgcgccccgatccatgcggctgtggcaacagcgccatccg
gagcgttatgaccgtctgcaacgggtgcggcgtgtgatcaaccgcatcgccgaagacacc
cgcacgccggccgagatgatcatcaagccacagatcctacgcaacctgtgctgggtggaa
gacccggtggaagtggacgtcgagacgttcctgatcgagcagggcgcaaggaactggcaa
gtgaaactcattgcaccgtccgtaagtggcgttatcatgtag
DBGET
integrated database retrieval system
